Xiphophorus hellerii (green swordtail): 116733066
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Entry
116733066 CDS
T07363
Name
(RefSeq) collagen alpha-2(VIII) chain-like isoform X1
KO
K23284
C1q-related factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116733066
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
Opsonins
116733066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Tropomyosin
CCDC39
XhlA
V_ATPase_I
HAUS1
DMPK_coil
ADIP
FPP
COG6_N
CC_CEP250
DUF7310
DUF724
Fez1
Motif
Other DBs
NCBI-GeneID:
116733066
NCBI-ProteinID:
XP_032439647
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All DBs
Position
14:5981805..5983510
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AA seq
270 aa
AA seq
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MNFTTWMLVLFCGLTLAQNDVNETEISGETKLSFPEMSLLLLELGAVKAKLEAVETKLKE
TESQVLVLNEKGKSLETKLKETESQVLVLNEKGKSLETKLEGTESQVLVLNEKDKSLETK
LKETESQVLVLQDKEATKVVFSAGIGGSVNIGPFTTPKTLAYTTVITSLGNAYNQHTGIF
VAPVRGIYYFSFFYHAGGGYSVTLRLMKNNQIVLESTDYKTSHDAADNGGNAGLVELQQR
DQVYVQLYANTHVWGNIHTTTFSGFLLHKV
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcactacttggatgctggtgttgttctgtggtctaactttggcccagaatgat
gttaatgaaacagaaatctctggtgaaacaaagttaagttttcctgaaatgtcactcttg
ctcctagagctcggtgctgtgaaagcaaaattagaagctgtggaaacaaagctgaaagag
accgaaagtcaggttctggttctcaacgagaaaggtaaatccttggaaacaaaactgaaa
gagaccgaaagtcaggttctggttctcaacgagaaaggtaaatccttggaaacaaaactg
gaaggaaccgaaagccaggttctggttctcaacgagaaagataaatccttggaaacaaaa
ctgaaagagactgaaagccaggttttggtgcttcaggacaaagaagcaaccaaggtagtt
ttcagtgctggaataggagggagtgtaaacattggacccttcaccacaccaaagacctta
gcctacacaacagtcataacaagtttgggcaatgcctacaaccagcacacaggtatcttt
gttgcacctgttagaggaatatactacttctccttcttctatcatgctggtggaggatat
tcagtgactctgcgcctcatgaagaacaatcagattgttctggagagcactgattataaa
acatctcatgatgcagctgataatggagggaatgctggcttggtggagctgcagcagaga
gaccaggtctacgttcagctttatgcaaacacccatgtttggggaaacatccacacaact
acatttagtggctttcttctacataaagtctga
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