Xiphophorus hellerii (green swordtail): 116733087
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Entry
116733087 CDS
T07363
Name
(RefSeq) coronin-1B-like
KO
K13886
coronin-1B/1C/6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116733087
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116733087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
116733087
NCBI-ProteinID:
XP_032439678
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Position
14:complement(14167563..14178410)
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AA seq
509 aa
AA seq
DB search
MSFRRGVVRQSKFRHVFAQAWKAEHCLDDVRVSRVTWDGPLCAVNPKFIAVIIEAGGGGA
FLVVPIGKSGRIDQSCPTVCGHAAPVLDIQWCPHDDNIIASASEDCTVKVWQIPDGGLTS
PMTDPIVTLEGHSKRVGILAWHPCAFNILLTAGCDNVVFVWNVGTGELVYQLADAHPDLI
YSVGWNKDGSAVCTVCKDKALRIIDPRRGAVLKVREKVHDGTRPMRAVFLADGKILTTGF
SRMSERQLALWDAKDLSEPMAVQEMDTSNGVLLPFYDPDTNMVYLCGKGDCTIRYFEVTD
ESPYVHFLSLYSSKEPQRGAGFLCKRGVDVNKCEIARFYKLHERKVEPISMTVPRKSDLF
QGDLYPDTAGLEPALLADEWIAGQDAAPLLVSLSGGYAAPPSKHRDTLRSKPKLSSQDSG
AGGAATAATVAAAPTPTPTSAAKEVEGETPQPRVTARETDGNTERPRREDEMLSELLAEM
KALRAVVLAQNQRIELLERQLARIEDGDV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccgtagaggtgtggtccggcagagtaaatttcgccacgtcttcgctcaggcc
tggaaggccgagcactgcctcgatgacgtcagagtgtcccgggtgacatgggacggcccc
ctctgcgcggtcaaccccaagttcatcgcggtcatcatcgaagcggggggaggaggcgcc
ttcctcgtcgttccgatcggcaagagcggcagaatcgaccagtcctgccccacagtctgc
ggacacgcggcgcctgtgttggacatccagtggtgtcctcatgacgacaacatcatcgca
agtgcctcagaggactgcacagtgaaggtgtggcagatccccgacggcgggctcaccagt
ccgatgacggacccgattgtgaccctggagggccacagtaaaagagtgggaatcctggct
tggcacccttgtgccttcaacatcctattgactgcaggctgcgataacgtggtttttgtg
tggaacgtgggcacgggcgaactcgtgtaccagctcgccgacgcccacccggacctgatc
tacagcgtcggctggaataaggatggcagcgccgtgtgtactgtgtgcaaggacaaggcc
ctgcgcatcatcgacccacgtcggggcgctgtcctgaaggtcagagaaaaggtccatgat
ggtacaaggcccatgagagccgtcttcctcgccgatgggaaaattttgaccacaggcttc
agccgtatgagtgagaggcagctcgctttgtgggacgcaaaagatctctctgagccgatg
gctgtgcaagaaatggatacaagtaacggagttcttcttcccttttatgaccctgacaca
aacatggtctacctttgtggaaagggggactgcaccatccggtattttgaagtgacagac
gagtctccctacgttcacttcctgagtttatacagcagtaaggagcctcagaggggtgca
gggtttctttgtaaaagaggcgtggatgtcaacaagtgtgaaattgccaggttctacaag
ctgcatgaaaggaaagtggaacccatttctatgactgtaccacgtaaatcagatctcttc
cagggagacctgtacccagacactgcaggcttggagccggctctgctggcagatgaatgg
atcgccggacaggacgcagcacctctgctcgtctctctgagcggagggtacgcggctcct
ccttccaaacacagagacaccctcagaagcaagcccaagctaagctctcaggactccggg
gccgggggcgccgccacagcagcaaccgtagcagccgctcccacacctacgcctacctct
gccgccaaggaagtggagggagaaacgccgcagccacgagtgaccgcaagggagacggat
ggaaataccgagaggccgaggagagaggatgaaatgttgagtgaattgttagcagagatg
aaggccttacgggcagtcgtgctcgctcagaaccagagaatcgagctgctggagaggcag
ctcgcccggatcgaagacggcgacgtgtga
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