Xiphophorus hellerii (green swordtail): 116733201
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Entry
116733201 CDS
T07363
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116733201 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116733201 (poln)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116733201 (poln)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
116733201 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
116733201
NCBI-ProteinID:
XP_032439872
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Position
14:complement(10927804..10976409)
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AA seq
1102 aa
AA seq
DB search
MFSQFKDVEAPDETLPSTTEQPDSHSVACHTLLPFSDERKETVNSSSAHNEDEAIWDVSA
NEAESLELSGRRVKCIESVSNLSEEAAGGVDKHQQSELNTTENKRGHLPPIDFVTKDVGQ
TVADIAERRLSEGPLVQSEATTFIQEDNSSHNLERFGLVAVAVERRSETDYEENIEHKLL
NCFATEDTDLHRINTDVQKLEEVRFLPKSAEGSDGERCLVPTLSLEFEPLRSEFRPLDRR
DNQQHHGKLQDLITNTTSLDKELYIKQQTTGIHSHHPPLTPSFPQKRKCDVFHHQCVSPL
LKSHKKSHPPKWEPPCSSPWTVVEGGVSEVKKIRLQTFISGCPTSSEEQQFKITPKTDVR
FKIPTQSHVLEQTQPISQSKLEKSSNEMGKIAPKQNLFAKLCKRRLAKLRIDPAIDGLKG
FHDVVTTSELQTHSKAGSHPTSLTSDGRIKDGGRLNPEERVQMLKQAGQAEVVVLTMMFQ
DGATQLDREQKLAPAVCGLLVLMKNDLCCATPCWSLGPNDSLVYLKLEHNPPWAQQQLQH
TQQPFTRDMILCVLSRSKLVVCYKAKDFLRTVLLLYKQDLSWKQVAGCQIQDPRVSGWLL
DPTDPSSCFKDLLNKHCKKPRATASLSPDKVSHIISSLYWLFDLNLALCSKLQSHGLWEL
YSEIELRMITVLAVMESHCIYVDKGALKRTSDLLGTKLKQLEQEAHKAAGEIFLVTSNAQ
LRTVLFEKLRLQERCENKKLPKTINKQQQSTSEAALLQLQDLHPLPKIILEYRQVHKMKS
TFVDGILSCMKSKNYISSTWHQTSAVTGRISAKHPNFQALPRQPLQISQNQYIQGKEEEV
VTIHPRDMFIPREGWTFLAADFCQVELRLLAHFSSDPELLRIFTDPQADVFTMLASQWKV
VGVDEVTPEDREHAKRIVYSVVYGAGRERLSGILGVNVEQASRFQDSFLQTYREVQAFIQ
RTIQQSHKQGYVVSLMGRRRLLPNISSPDWGIRMQAERQAVNFVVQGSAADLCKMAMITM
FNLVSSSSSLSARLLAQLHDELLYEVEDSQVEQFAGLVKSTMESLQYIHHVGVHLTVPLK
VAVSVGKSWGSMSELHTPPSVS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcaattcaaagacgtcgaagcccctgatgaaacgctcccctcgacaacagag
cagcctgattctcattctgtagcttgtcacacactattacccttctctgatgaacgtaaa
gagacagtgaactcatcaagtgcacataatgaagacgaagctatctgggatgttagtgcc
aatgaggcagagagccttgaactttcaggcaggagagtaaagtgtatagagagtgtgtct
aacctctcagaagaggctgctggtggtgtagataaacatcagcaatcagagctgaacaca
actgaaaataaaagggggcacttgcctcccattgactttgtaacaaaagacgtaggccag
acagtggctgatatagcggagaggagactctcagagggacctctagttcagtctgaagcc
actacatttatccaggaggacaacagttctcacaacctggaacggtttggcctcgtagct
gtggcagtggaaagaaggtcagaaacagactatgaggaaaacatcgaacacaaactgctg
aactgctttgctactgaagacacagatttacacagaataaacacagatgttcagaagtta
gaggaagtcagatttttgcctaaatctgcagagggctcggatggtgagcgatgtcttgta
ccaacactttccctggagttcgagccgcttaggtcagagttcagacctctcgatcgtcgc
gacaaccagcaacatcatggcaaactgcaggacttgatcacaaatacaacatcacttgac
aaagaactatacataaaacaacagactactgggattcattcacatcatcctcccctcact
ccatcctttccccaaaaaagaaaatgtgatgttttccaccatcaatgtgtaagtccactc
ctgaagagccataaaaaaagtcaccctccaaagtgggaaccgccgtgttcctcaccatgg
acagtggtggaaggaggcgtcagcgaggtgaagaaaatcagacttcaaacattcatttct
ggatgcccaacatcatcagaagaacagcagtttaaaatcactccgaagacagatgttagg
tttaaaattcctacacaatcacatgttctggagcaaacgcagcccattagtcagagcaaa
ctggaaaaatcctccaatgaaatgggaaagattgctccgaaacagaacctctttgccaaa
ctgtgcaaacgtaggttggccaaattgaggatcgatccagccattgacggtctgaaaggt
tttcatgacgtagttacgactagtgagctacaaactcactccaaggctggctcacaccct
acaagcctgacatccgatggcagaataaaggatggtgggaggctgaacccagaggagaga
gtgcagatgctgaagcaggctgggcaggcagaggtggtggtgctaacaatgatgtttcag
gatggagcaactcaattagatcgtgaacaaaagctcgctccagcagtgtgtggcctcctt
gtgctgatgaagaatgatctttgctgtgccacaccttgttggtcactggggccgaatgac
agcctggtctacttaaaactagagcacaaccctccatgggcacaacagcaacttcagcac
actcagcagccttttaccagagatatgatactatgtgtgctgtcaaggtcaaaactggtg
gtttgctataaagccaaggattttcttcgtacagttctgctgttatacaaacaggatcta
agctggaaacaagtggcaggttgtcagatccaagatccacgggtttcagggtggctgctg
gatcctactgatccctcctcctgcttcaaagacctgcttaataaacactgcaaaaagcca
cgtgcaacagcctccctgagtcctgacaaggtttctcatatcatctcaagtctctattgg
ctctttgaccttaatctggccttatgctctaaactacagagccatggcttgtgggaactc
tactcagaaatagagctgagaatgatcactgttcttgctgtcatggaaagccactgcatc
tatgtggacaaaggagcacttaagaggacttcagacctgcttgggactaaactgaaacag
ctggagcaagaggcccacaaagcagctggggaaatattcttggtgaccagcaacgctcag
ctacgaacagtactgtttgagaagctgcgcttacaggagcgctgcgagaacaagaagcta
cccaagaccatcaacaaacaacaacagtcaacatcagaggcagcgttgctgcagctccag
gaccttcatcctctgccaaaaatcatcctggagtaccgacaggtccacaagatgaagtcc
acgtttgttgatgggattttgtcatgtatgaagagcaagaactacatttcttctacatgg
caccagacgagtgctgtgactgggagaatatcagccaaacaccctaacttccaagccttg
ccaaggcagccgcttcaaatcagccagaaccagtacattcaaggaaaggaggaggaggtt
gtgacgattcatcctcgagacatgttcattccccgggagggctggacttttcttgctgcg
gacttctgccaggtggagctccgcttgctggctcacttctcctcggacccggagctgctc
cgcatttttaccgacccgcaggccgacgtcttcaccatgctggcctctcagtggaaagtg
gtgggtgttgatgaggtgactcctgaagacagggagcatgccaaacgcatcgtatattcg
gtggtttatggagcaggccgtgaacgtctgtcagggattttgggggtgaacgttgagcag
gctagtcgtttccaggacagcttcctccagacctacagagaagtccaggcgttcatccag
agaaccatccagcagagtcacaagcaaggttatgtggtgtcgttaatgggacgccgacgt
ctccttcccaacatcagctccccagactgggggatccgcatgcaggctgagaggcaggcc
gtcaactttgtggttcagggctctgctgctgatctctgtaagatggctatgatcaccatg
tttaacctggtctcctcctccagctcgctctctgccaggcttttagcacagcttcatgat
gagcttctttatgaagtggaagactctcaggtggagcagtttgcaggtttggtgaaaagc
accatggagtcccttcagtacatccaccatgtcggagtccatctgacggtacccctgaag
gtggcggtctccgttggcaagtcctggggatccatgtcagagcttcacactccgccttct
gtctcctga
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