Xiphophorus hellerii (green swordtail): 116733284
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Entry
116733284 CDS
T07363
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23284
C1q-related factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116733284
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
Opsonins
116733284
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
TNF
DUF3127
DUF1191
BclA_C
Motif
Other DBs
NCBI-GeneID:
116733284
NCBI-ProteinID:
XP_032439972
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All DBs
Position
14:5913246..5921107
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AA seq
218 aa
AA seq
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MTFSVWLLVCFCGLTLGQDVLLETEVATEIGSCFPDMCKFLKEFGAMKAKLEAVETNLKE
KSEALETRQTETENQVLELKKKDATNIAFSAATGGSGSNGPFDTDTTVIYRKLIINVGNA
YNQHTGIFVAPVPGIYYFTFFYHAGGSQVASLSLMKNNEKVVITYDHKTSQDGADNGGNA
AFLQLQQGDQVYVRMHANSHIWQNNYITTFSGVLLRPL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgactttcagtgtgtggttgttagtgtgtttctgtggtttaactttgggccaggatgtt
ttacttgaaacagaagtcgctactgaaatcgggtcatgctttcctgacatgtgtaagttc
ctcaaagagtttggagccatgaaagctaaactagaagctgtggaaacaaatctgaaagag
aaaagtgaagccttggaaacgaggcagacggagactgaaaaccaggttctagaactgaag
aagaaagatgcaaccaacatagcatttagtgctgcaactggtggcagtggaagcaatgga
cccttcgacacagacacaaccgtgatctacagaaaactaataatcaatgtgggcaatgcc
tacaatcagcacacagggatcttcgttgcaccagttccaggcatatactacttcaccttc
ttttatcatgctggaggatcacaagttgccagtctatccctgatgaagaacaacgagaaa
gttgtgataacctatgaccacaaaacatcacaagatggggctgataatggaggcaatgca
gctttcctgcaactgcaacaaggagaccaagtgtacgtgcggatgcatgcgaacagtcac
atctggcagaacaattacatcaccaccttcagtggtgttcttctgcgtccactctga
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