Xiphophorus hellerii (green swordtail): 116733330
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Entry
116733330 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116733330
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116733330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_6
ANCHR-like_BBOX
zf-RING_5
U-box
Prok-RING_4
zf-RING_2
MRP-S31
CC_BshC
Motif
Other DBs
NCBI-GeneID:
116733330
NCBI-ProteinID:
XP_032440030
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Position
14:complement(25113617..25117550)
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AA seq
557 aa
AA seq
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MAQPGSLVDSMKFFCSICRDLLKDPVTIPCGHSYCMNCIKDCWDGEDQRRIHSCPQCRKE
FIPRPELVKNIMLAELVEDLRKTGLQTAPVDHCYAGPEDVACDVCTGRKMKAVKSCLVCM
ASYCKNHLQPHYESPTFKKHNLVEASTKLLQNICSRHDEVMKIFCRTDQQCICYLCTMDE
HKGHETVPAATERAEKQKKLQESRQQIQQRIQDQEKDVKLLQQEVEAINVSADKAVEDSE
KIFTDLIRLLQKRSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSRHKIQPRKNFKDVTAAVSELRDKLLDILRQKRTKTSLTA
IKVGVLQLEPEPKTRHDFLKYSQEITLDSNTAYIDLLLSEGNRKTTLMKQQQSHPYHPER
FTYYDQVLSRESLTGRCYWEVEWRGEGVRLAVAYRSIRRGGGSDESAFGRNDKSWALRCD
KNSYQFWHNNIETPVSGPVSSRIGVYLDHSAGILSFYSVCLSTMTLLHRVQTRFTQPLYA
GVWLFNYGTTAEFIKAK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccaggaagtcttgtggattcaatgaaattcttttgttcgatctgtcgggat
ctactgaaggatccggtgactattccctgtggacacagttactgtatgaactgtattaaa
gactgctgggatggagaagatcagagaagaatccacagctgccctcaatgcaggaaagag
ttcataccaagacctgaactggtgaaaaacatcatgctagcagagttggtggaggatctg
aggaagactggactccaaactgcaccagttgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagatgaaagctgtcaaatcctgtctggtctgtatg
gcttcctactgtaagaatcatcttcaacctcactatgaatcacctacgtttaaaaaacat
aatctggttgaagcgtctactaaacttctgcagaacatctgctctcgtcatgatgaggtg
atgaagatcttctgtcgtactgatcagcagtgtatctgttatctctgcactatggatgaa
cataaaggccatgaaacagtcccagctgcaacagaaagggctgagaagcagaagaagctc
caggagagtcgacaacaaatccagcaaagaatccaggaccaagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgag
aagatcttcactgatctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tccagacataaaattcaaccccggaaaaactttaaggatgtgacagcagctgtgtcagag
ctcagagacaaactcttggacatcctgagacagaaaaggacaaaaacctctctgacagcc
atcaaagtgggcgttctacagttagagccagaacctaaaaccagacatgatttcttgaaa
tactcacaagaaatcactctggattcaaatacagcatacatagatctgttattgtctgag
ggtaacagaaaaactacattgatgaaacaacaacagtctcatccttatcatccagagaga
ttcacttattatgatcaggttctgagtagagagagtctgactggacgttgttactgggag
gtggagtggagaggggaaggagttcgtctagcagttgcatacagaagcatcagacgtgga
ggagggtcagatgaatccgcatttggacgaaacgataaatcttgggctttacgttgtgac
aaaaatagttatcaattttggcacaataacattgaaactccagtatcaggtccagtttcc
tccagaataggagtgtacctggatcacagtgcaggtattctgtctttctacagcgtctgt
ctttctacaatgactctcctccacagagtccagaccagattcactcagcctctgtatgct
ggggtttggctttttaactatggaaccacagctgagttcattaaagccaaatag
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