Xiphophorus hellerii (green swordtail): 116733384
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Entry
116733384 CDS
T07363
Symbol
rab39b
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116733384 (rab39b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116733384 (rab39b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xhe04031
]
116733384 (rab39b)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
116733384 (rab39b)
GTP-binding proteins [BR:
xhe04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
116733384 (rab39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
TniB
Motif
Other DBs
NCBI-GeneID:
116733384
NCBI-ProteinID:
XP_032440109
LinkDB
All DBs
Position
14:complement(7627656..7637406)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTREIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatctggctctaccagttccgcctcatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggtcgcttcgcccaggtgtccgaccccacc
gtgggcgtggacttcttctcccgcctggtggagatcgagcccgggaagcggatcaagctg
cagatctgggacaccgccgggcaggagcgcttcaggtccatcaccagagcttattaccgt
aactctgtgggcgggctcctcctcttcgacatcaccaaccgccgctccttccagaacgtc
cacgactggctggaggaggcgcgcagccacgtccagccgcacagcatcgtcttcctgctg
gtgggccacaagtgcgacctcgaggcacagcgccaggtgacccggcaagaagcggagaag
ctggccggggcgtacggcatgcgctacatcgagacgtcggcgcgcgacgccatcaacgtg
gagcacgccttcaccgagctgaccagggagatcttcgccttggtgcggtccggcgacatc
accatccaggagggctgggagggcgtgaagagcggcttcgtgcccaacgtggtccactcg
tcagaggaggtgaccaagagcgaccgccgctgcctctgttga
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