Xiphophorus hellerii (green swordtail): 116733407
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Entry
116733407 CDS
T07363
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116733407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116733407
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116733407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
116733407
NCBI-ProteinID:
XP_032440144
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All DBs
Position
14:3683126..4496385
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AA seq
1680 aa
AA seq
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MTRVLRFLCWPLWPLALFSMLATVDMLEFGGATGQYARYGRWEAGSVGELSFSLKTNVSK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPAILHMETRVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPLDVRLSALTSSTVKYEPPFMGLITNLK
VGEMPPTLLNSQGIESDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRFRGKYCKEAEE
YAVEGLAHLTLNDQGDSSLVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIDRDPKITLHGDLVFRCEDVAALDPVTFEAPEAFISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLDGYLYLLIDMG
SGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFLSPEGSEILDLDSDMYLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLSEIQSALGVSSFCTRELQ
KRCSSAPCGNGGLCKEGWNRYICDCTGTGYLGTNCEIEATVLSYDGSMYLKIIMPITMHT
EAEDVALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPET
LFAGQKLNDNEWHSVKVVRRGKSLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLSFNSVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGNDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKSMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHKVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAILVRVESAKGLGDYLELHIERGKVGVIFNVGTDDITIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNERLALARQRIPYRLGRVVDEWLLEKGRQLTIFNS
QAFIKVGGGEKGRHFQGQMSGLYYNGLQVFKLAAEGDPSVQTQGNLRLVGDVPSVLTTDT
TSTTPLADMSTTIMETTTTMATTTTRKGRSPTMRDSVTQNADDLLVASAECPSDDEDLEE
CEPGNGGELVLPIITVDSLDPPSIATHYPVIPPPPTTYRPFLTLLETTKESVPMPNGRPP
CPLDQEDCEETIEVSGSGEMTETDDEDYYKNSPLVTDRTVLPPPPAVEGGVQNPRDRHFS
RNPNSHRPPLSSTPTANPDQLGPRVKPAAGGSSSSSNNIPAGKMNTRDQVLLPPAHPSSD
PGHRRIPGITYPPNFPHVPTPDPTSPERGLPGAVEVQQSSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPATAKTVTKNKKNKDKEYYV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggtgttaagattcctatgctggcccctgtggcctttggcccttttcagcatg
ctagctaccgtggacatgctggaatttggtggggcaacaggccagtacgcacgctacggc
cgctgggaagctggatccgtgggtgagctcagcttcagtctcaagaccaacgttagcaag
gccttggtgctctatctggacgacggtgggaactgtgacttcttggagctgcttatcgct
ggcggccgccttcagctgcgtttcgccatccactgtgccgagccggccattctgcacatg
gagacgcgggtcaacgacgaccgctggcacatggtcttgctcacccgcaattttcgcgag
actttgctaatggtggacggcgagacaaaagtggccgaggtcaaatcaaagaggaaggaa
atggcggtggtcagcgacctattcgtgggtgggatccctcttgatgtgcgcctctctgct
ctgacctccagcactgtgaagtatgagccacccttcatggggctaatcaccaatctgaag
gtgggggagatgccacccacgctgttaaacagccaaggcattgagagcgacctggagtac
ctctgcaccaaacaaaacccgtgcttcaatggagggttttgctcaattcagtatggagaa
gttcactgtgactgtacccacacccgcttcagggggaagtactgcaaggaagctgaagag
tatgctgtggaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctctagtt
ggcaaggaagagtccgtcgccaccttcaagggcaacgagttcttctgctacgacctgtcc
ctgacccccatccagagcagcaccgacgaaataacgctctccttccgaacgctgcaacgc
aacggcctcatgctgcacaccgggaagtcggcagactacgtgaacttgtccctgaagagc
ggcgccgtctggctggtcatcaacctgggctccggggccttcgaggccctggtcgagcca
gtcaacggcaagttcaacgacaacgcctggcatgacgtgcgcgtcacacgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctctgtggatggtattttgaccacc
actggctacacccaggaggactacaccatgttgggctccgatgacttcttctacatcggg
ggaagccccaacacggcagacctgcctggatcaccagtcagcaacaactttatgggctgc
cttaaagatgtggtgtacaagaacaacgacttcaagctagagctctcccggctggccatc
gaccgcgaccctaagatcacgctgcacggcgacctggtgttccgctgcgaggacgtggcg
gctctcgaccccgtcacattcgaagctcccgaagctttcatctcgctgccaaagtggaac
accaagaagacgggctccatctccttcgacttccgcaccaccgagcccagcggactgctg
ctgttcagccacggacgtcctcaggggcccaaagagcagaagcccgggagggaactgaag
accgattactttgctatggagctgctggacgggtatttatacctgctgatcgatatgggc
tctggaaaaacaaagctcaaggccagcaacaagaaggtcaatgacggagaatggtgccat
gtggatttccagagggaagggaggaaagggtctatctccgtcaacagccgcagcatgcca
ttcctgtccccagagggcagtgagatcctggacctggacagtgacatgtacctgggcgga
ctgcccgagtccaagtcggacctcatcctgccgccagaggtctggacggcgctcctgaac
tacggatacgtcggctgcgtccgcgacctgttcatcgacggcaagagccgcgacgtccgc
cgcctgtctgagatccagagcgctctgggcgtcagcagcttctgcacccgcgagctgcag
aagcgctgcagcagtgccccgtgtggcaacggtggcctgtgcaaggagggttggaaccgg
tacatatgtgattgcactggcacaggatacctgggtaccaactgtgagatagaggcaacc
gttctgagttacgacggcagcatgtacctgaagatcatcatgcccatcaccatgcacacg
gaggccgaggacgtggcgctgcgcttcatgtcgcagcgggcatacggcctgctcatggcc
accacctccaaagagtcggcggacaccctgcgcctggagctggacggaggccgggtcaaa
ctcactgtcaacctcgattgtatcaggatagactgtagcctcagcaaaggacccgagacg
ctgttcgcggggcagaagctgaatgacaacgagtggcactcggtgaaggtggtgcggcga
ggcaagagcctgcagctgtctgtggataatgtcacagtggaaggccagatgaccggtgcc
cacacacgcctagagttccacaacatcgagacgggcatcatgacggagcgccgcttcatt
tccgttgtgccttcaaactttattggccacctgcagggcctgtccttcaacagcgtaccc
tacctggatcagtgtaagaacggggacatctcctactgcgaactgaacgcccgctttggc
atgaggcacatcatcgccgatcctgtgacgtttcgaacgaaaggcagctacttagcgtta
gccacattgcaggcctacgcctccatgcacctgttctttcagttcaaaaccaccacgccg
gatggcctcatgctcttcaactctggagatgggaacgatttcatcgttgtggaactggtg
aaagggtacgttcactacgtgtttgatctcggcaacggcccgtcgctgatgaagggcaac
tcagacaagccgctcaacgacaatcagtggcacaacgtggtggtgtcccgggatgccaac
aatgtacacacgctgaagatcgactcgcgcaccgtgacgcagcactccaacggagcccgc
aacctggacctcaaaggagagctgtacatcggtggcgtgacgaagagcatgtacagcaat
ctgcccaaactgatcgcatcccgggacgggtaccagggctgcctggcctctgtggacctg
aacgggagactccctgacctgatcgcggatgccctccacaaggtggggcaggtggaacga
ggctgcgacggacccagcaccacctgtacggaggagtcctgctaccatcagggggtctgt
ctccagcagtgggagggcttcacctgcgactgcacaatgacgtcctacggaggctcattt
tgcagcgaccctgggacaacgtacatctttggacgaggcggagccctcatcacatacacc
tggccacccaatgaccggccgagcacgcgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaagccattttggtcagggtggagagcgccaagggactgggagactacctg
gagctgcacatagaacggggaaaggtcggcgtgatcttcaacgtgggaacagacgacatc
accatcgaggagagcgcggtgatggtgagcgacggcaaataccatgtggtgcgattcaca
cgcagtggcggcaacgccacgctgcaggtggacaaccagcccgtcatcgaacgtttcccc
tcagggaactttgataatgagcgcctggctcttgctagacaaagaatcccataccgactt
ggtcgggtagttgatgagtggctactcgaaaaaggtcgccagctgaccatcttcaacagc
caggcgttcattaaagtcggtggtggagagaaggggcgccacttccagggccagatgtcg
ggcctgtactacaacggcctgcaggtgttcaaactggcggctgagggcgaccccagcgtc
cagacccagggcaacctgaggctggtgggcgacgtgccctcggtgctcactaccgatacc
acctccaccaccccactggctgatatgtccaccaccatcatggagacaacgaccacaatg
gctacaaccaccacccgcaaagggcgctcgcccaccatgagggacagcgtcacacagaac
gccgacgacctcttggtagcttcagcagagtgtccgagcgacgacgaggatttggaggag
tgcgagcccggaaatggaggtgaattagtgttgcccattataacggtggactccctagac
cccccctctattgccacccactacccagtaattcccccaccccccaccacctatcgccct
ttcctcaccctgcttgaaaccaccaaagagtccgtccccatgcccaacggccgcccccct
tgtcccttggatcaggaggattgcgaggagaccatagaggtttcgggttcgggggagatg
acagagacggatgacgaggactattataaaaactcccctctggtcactgatagaactgtc
ctccctcctcccccggcagtcgagggcggggtccagaacccccgagaccgccacttctct
cgcaaccccaactcccatcgcccaccgctttcctccacccccactgccaaccccgaccag
ctaggcccccgcgtcaaaccggccgctggcggcagcagcagcagtagcaacaatatcccc
gctggcaaaatgaacacccgggatcaagtgctgctgccgccggcccacccctcgtcagac
ccgggccaccgcagaatcccgggaataacataccccccaaatttcccccatgttcccact
ccagatcccacgtctccagagagaggcctccccggcgccgtggaggtgcagcagtccagc
agcaccacggggatggtggtgggcattgtagcggcggcagctctctgcatccttatcctg
ctctatgccatgtacaagtaccgcaaccgagacgagggctcctatcaggtggaccagagc
cgcaactacatcagcaactcggccacgcagagcaacggcgctctggtgaaggagaaacag
cccgccactgccaagacggtcaccaagaacaagaagaacaaagacaaggagtactatgtg
tga
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