Xiphophorus hellerii (green swordtail): 116733634
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Entry
116733634 CDS
T07363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116733634
04082 Neuroactive ligand signaling
116733634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116733634
Ion channels [BR:
xhe04040
]
Ligand-gated channels
GABA-A
116733634
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116733634
NCBI-ProteinID:
XP_032440308
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Position
15:24646138..24660404
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AA seq
470 aa
AA seq
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MHTDVVLFSVLLWMVEVSGHKRTRGQSLQPYRHIRLTQEMSPLGLSHKIGSPIFKRSPDI
TKARATKSEQLLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHY
WKDDRLSFKSNTNQSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVL
YSLRVTVTAMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQ
FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDR
RAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWISFVFVFLSVIEYAAVNY
LSTLQERKERKLRDKLPCTCGIAHPGMMSDCYSEVDVNTTGNYGMPEENGMRRERMLVEL
AMETDQMTGHVGSRAYSSIWIDTHAIDKYSRVIFPGSYILFNIIYWSIYS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggatgtggttctgttcagcgtgctgctctggatggtcgaggtgtccggacac
aagcgcaccagagggcaaagtctgcaaccgtatagacacatcagattgacacaagagatg
tctccactaggactcagtcacaagattggcagcccgatattcaagagaagtccagatata
actaaagccagggctacaaagtcggagcagctgctgaggatagatgaccacgacttcaca
atgcgaccagggtttggagggcctgccgtcccagttggagtggatgttcaggttgaaagc
ctggatgcgatttcagaggttgatatggatttcactatgaccttgtatctgaggcactat
tggaaagacgatcgtttgtcatttaaaagcaacaccaaccagagcatgaccttcgatggt
cgcctggtgaagaagatatgggtacctgacatgttttttgtccactctaagaagtcgttc
acacatgacacgaccacagacaacgtcatgctgcgagtgtaccccgatggcaaagtcctt
tacagcctcagagtcacagtcacagccatgtgcagcatggacctgagtcgttttcctctc
gacacacaaacgtgctcattggaaattgaaagctatgcctatacggacgatgacctgatg
ctgtactggaaggaagggaacaggtctttaaacacggatgagagaatttctctctctcag
ttcctcattcaggagttccatacgaccacaaagctggcattttacagcagtacaggctgg
tacaaccggctgtacatcaacttcaccctacggcggcacatcttcttcttcctgctgcag
acgtactttcctgccactctgatggtcatgctgtcctgggtgtccttctggatcgaccgc
agggctgttcctgccagagtgccacttggtataactacagtgctaaccatgtcaaccatc
atcactggagtcaatgcctccatgccgagggtgtcttatattaaagctgtggatgtttac
ctgtggatcagcttcgtctttgtcttcctttcggtcatagaatatgccgccgtcaactac
ctgtctactctccaggaacgcaaggaaagaaaactgcgggacaagttgccatgtacttgt
ggcatagctcatcctggcatgatgtcggattgctacagtgaggtggacgtcaacaccaca
ggaaattacggcatgccagaggagaatggcatgagaagggaaaggatgctggttgaactg
gccatggaaactgaccagatgacaggccatgttggctccagggcttacagcagcatctgg
attgacacacatgccatagacaaatactccagggtcatctttcctggatcttatatcctc
ttcaacatcatctactggtctatttactcttaa
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