Xiphophorus hellerii (green swordtail): 116733636
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Entry
116733636 CDS
T07363
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116733636 (ppfibp1)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116733636 (ppfibp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
116733636
NCBI-ProteinID:
XP_032440313
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Position
2:complement(14127014..14147950)
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AA seq
993 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPFMGSLRALHLLEDLRSVIE
LMDTEERESLRCQIPDSTADSLVEWLHGNLSNGHISLGGGDHYQERLSRLEGDKESLVLQ
VSVLTDQVEAQGEKIRDLDICLDEHREKLNATEEMLQQELLCRTALETQKLDLMSEVSNL
KLKLNSLDKERLDFDRFRDSEDFILEINELRYRLTELDSEKLQYEKKLKSTKSIMAKLSS
MKIKMGQMQYEKQRKEHKLQSLKEELSSLRRQLEGKDGEMRRLQDDTAFKLVATSSHDGL
ERVSHPDETLRKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSLLRYKKVQDMVM
SVQGKKEKTKDVERLESPGDGSSLLLSGSSGSVESEKQDITDVEELQTKKPDEPERLSGL
SEDSSPSPSPADPVRLSEHAQTEGQSNYELSKNDGQVQLEDGNNEMSTSEENSKMSEKPP
MNPSATLPASIIDDSFGSRKARSSFGKGFFKIRGGKKTSSSPNLDRSRSASAPMLAETER
QGTDHLDLAGVPQRSSNSDSTHTLPTTPESRKKSKGIKKLFGKLKRSQSTTFNLDDNLPE
GEFKRGGVRATAGPRLGWSRDFQRVNNEVDAPFARWSKDQVCDWLQEQGLGLYVNMARVW
IHSGQTLLQASQQDLERELGIKQQLHRKKLQLALQALGSEEEDNKGKLDYNWVTRWLDDI
GLPQYKTQFDEARVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRR
RPSDEKNISPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVEAMAL
LLNIPPNKTLLRRHLATHFSLLIGSEAQQLKQECLENPDYTLLTATTKVKPRKLSFGNFG
MRKKKQEENEEYVCPMDVEMPKGRSFQKGFELQIYEDDLDRLEQMEDSEGTVRQIGAFSE
GIQNLTSMLKDDEFFKEMSNSPNPSVTDEESNA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgccagcgacatgttggcggctgccttagagcagatggatgggataata
gcaggctcgaaggccttggactattccaacggtctgtttgactgtcagtcgccaacctct
ccgttcatgggaagcttgcgggcgctccacctattggaggacctgcggagtgtgattgag
ttaatggacacagaggaaagggaaagtctccgctgccagatccccgactccaccgctgac
agtctggtcgagtggcttcatggtaacctgtccaacgggcacatctctctgggtggaggt
gaccactaccaagaaaggctgtcaagattagaaggcgacaaggagtctctggtgcttcag
gtgagtgtgctgactgaccaggtggaggcgcagggagagaagattcgcgatctggacata
tgtttggatgagcacagggagaaactcaacgccacagaggagatgctgcagcaggagctt
ctgtgcagaacggctctggagacgcagaaactcgatctgatgtctgaagtgtccaacctc
aagttgaagctcaactctttggacaaggagagactggactttgaccgatttagggacagt
gaggattttattcttgaaattaatgaacttcggtacagattgacagagctggacagtgaa
aaactgcagtatgaaaagaaacttaagtccacaaagtccattatggctaagctttctagc
atgaaaatcaaaatgggccagatgcagtatgagaaacagaggaaggagcacaaactccaa
tctctgaaggaggagctgtcgtctttgaggaggcagctggagggcaaagatggtgaaatg
aggagactacaggatgacacggccttcaaacttgttgccacaagtagccatgatggccta
gaaagagtgtctcatccagatgaaacgcttagaaagaggctgaaagaaaagcatgtggaa
gtgcaaagaatgaaaaaggcggttgaatcactaatggcagcaaatgaagaaaaggatcgt
aagatagaggagctcaaacagtcgcttttgcggtacaagaaagttcaagacatggtgatg
tcggtacaagggaagaaagagaaaacaaaagatgtcgagcggcttgagagtcctggcgat
ggatccagtctgctcttgtctggcagctctggctctgtggaatctgaaaagcaagacatt
acagatgttgaagagctgcaaacaaagaagccagatgagccggaaagactcagtggactg
agtgaagactcgtcgccctctcccagcccagctgatccagttcgactatcagagcacgca
cagacagagggccaaagtaattacgaactgagcaaaaatgatggccaggtccagttagaa
gacggcaacaatgaaatgtctacaagtgaagaaaacagtaaaatgagtgaaaaaccacct
atgaatccctctgccaccttgcctgcctccatcatagacgacagctttggttccagaaag
gctcgctcatcttttgggaaaggtttcttcaagatccgcggagggaagaaaacatccagc
agccctaacctcgaccgcagcaggagtgcaagtgcgcctatgctagctgagacagagcga
cagggcaccgaccatctggacctcgccggagtgccacagaggtcatccaacagcgacagc
acacacacgcttcctacaacgccggaaagcaggaagaaatccaaaggcataaaaaaactc
tttgggaagcttaagcggagtcagtcgaccacatttaacctggatgacaacctcccagag
ggagagttcaagcgaggcggagttcgagccacagcgggacccagactgggttggtctcgt
gatttccagcgagtcaacaatgaagtggacgctccgtttgcgcgctggtcaaaggatcag
gtctgtgactggctgcaggagcagggcctgggcctttacgtcaacatggcccgtgtgtgg
atccactcgggacagactctgctgcaggcgtcgcagcaagaccttgagagggagctgggc
atcaagcagcagctgcacagaaagaagctgcagctcgctttgcaggccctcggctcagag
gaggaagataataagggaaagctggactacaactgggtgactaggtggttggacgacatc
ggtcttcctcagtataaaacccagtttgatgaagccagagttgatggtcgaatgcttcac
tatatgaccgtggacgacctgctctccctgaaggtgggaagtgtcctgcatcacctcagc
atcaagagagcaattcaggttcttcgactcaacaactacgagcccaactgtttgcgccgc
agaccgtcagatgagaaaaacatttcacctgcagagatttcccagtggaccaaccacagg
gtgatggagtggcttcgatctgtcgacctcgccgagtacgctcccaacctcagaggcagt
ggcgtccacggaggcctgatggttctggagccccggttcaatgtggaggccatggctctg
ctgctgaacatcccccctaataagactctgctgcgtcgccacctggccacacatttcagt
ctgctgattggctccgaggcccagcagctcaaacaggaatgtctggagaacccagactac
actttgctcactgccaccactaaagtgaagccaaggaagttgtcatttggtaactttggg
atgaggaagaagaagcaggaggaaaatgaggagtatgtgtgcccaatggatgtggagatg
ccaaaaggtcgaagcttccagaaaggctttgagctccagatctatgaggacgacctggac
aggctggagcagatggaggactctgaagggacggtgagacaaatcggggccttttctgag
ggaatccagaacctgacgagcatgctgaaagatgatgaattctttaaagagatgtcgaac
tctccgaaccccagcgtaacggatgaggaatccaacgcatga
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