Xiphophorus hellerii (green swordtail): 116733795
Help
Entry
116733795 CDS
T07363
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116733795 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116733795 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116733795 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
MINT_RAM7
Motif
Other DBs
NCBI-GeneID:
116733795
NCBI-ProteinID:
XP_032440520
LinkDB
All DBs
Position
15:10298640..10481832
Genome browser
AA seq
3262 aa
AA seq
DB search
MDRVLLLSLLVLIDALLWQCCHTQQRGLFPAVLNLATMADITTNATCGTNGPEMFCKLVE
HVPGQPVRNPQCRTCNQRSTNSFEHHPIEYAIDGTNRWWQSPSIMNGMEYHYVTVTLDLK
QVFQVAYVIIKAANSPRPGNWILERSIDGVTFEPWQYYAITDTECLTRFNINPRTGPPSY
TRDDEVICTSFYSKVHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLVFQRIRTL
NADLMTLTLSDPKDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNSATKKFSCECEH
NTCGESCDHCCPGYHQQPWMAGTFLTRHVCEKCNCNNKAEECFFNQTVADLSLSLDTHGQ
YRGGGVCIGCRDNTAGINCQSCIPGYYRPTKVGADEEDPCIPCSCDPHGSISQTCVAEES
QASPGQPAGSCWCKEGFGGLRCDRCAVGYKDYPTCERCNCRVEGSINADPCVTPCICKEN
VEGENCDRCKLGFYNLQQDNRRGCEKCFCMGIASQCSPSTWSFENVTTLAGWHPVGETGG
RVWSVHRETPSYLTIRHLDVVNDLGSAYYWNAPEIYLGNKVAAYGGDVTFTVSYKTNQQA
AIRVTSEPDLIIEGGGMKLIDSWFGQPVYPSSTSTKHIILLPENFVVSETRQAISRRDFL
LVLANLTSLMVRASYSTETSAVYRLHSFSMQVANPLATGKRASAVEKCACPPGYGGLSCE
TCPPGFRRVYGKLYNGVCEPCRCHRHSSHCHEFTGHCLDCTHHTTGHHCDTCLPGYYGNA
THGTPQDCQPCACPLNLPSNNFSPTCHLGDKGELLCDQCQPGYTGPRCDSCSSGYYGQPA
APGGSCQPCICNGNLDLSIPNSCDAITGQCLRCRQGYNGVTCDSCAEGYYGDAMTLKSCQ
PCQCHTNGSVSEVCNKENGQCQCRENVIGRQCDKCMPNCWWDAELQECMPCRCSPYGSIS
QRCDTEGRCICRPGFMGRRCDLRRLGYERRETRRPVERVPLEAVQQRWGGTSRTTGGCPR
GAYRPQTGPQTHGVTTGGVCIPCHCNSYGSKSFDCDEKGQCRCQPGVTGPKCDRCSRGFF
NFQEGGCTPCQCSHVGNNCDANTGQCICPPNTIGERCDRCAPNHWGHDITTGCKECGCNV
IGSLSQQCNANTGCCFCRDSFRGEKCDECQIGYRDFPQCIQCECSVAGSDSQTCDLERGV
CACADRTGKCGCKQNVEGHNCDRCKTDMFGLSAKNPLGCSKCYCYGLTHSCMEAQGLIRM
WLTLRPEQTVLPLVDKSNTVEKRAGVSFQHPEILAHAEVVTTTLSEPYYWKLPEQFTGSM
ITAYGGQLKYAVYYEARDETGPSSYEPQVIIKGGPNHNIIITRHIPGLQIGQLTRHEIDM
TEHEWKFADGRSMSQEDFMDVLFYVDYILIKASYGNLMRHSRISEISLTVAEEGTPTEQN
EKAHQIEKCDCPTGYSGLSCEECAAGFYRLRAGSPVSVPASRLPTAAGMGSCVQCQCNGH
SSTCDPETSICQNCQDNTEGDHCERCAPGFYGVVRGSPDDCKPCACPLSNAENNFSPTCV
AEGFSDYRCTSCAEGYEGKYCERCATGYHGNPRMPGGRCEECKCTSWGSLPGPCHPVTGQ
CRCRVGTSGILCDQCMDRHVCGPSGIISCDDECSGLLISDMDRLYRIITDVTLTTPLPPP
YKALYHFENMTEELKHMLSPHKAPERLLQLADSNLGSLVVEMDQLHSRATKVSADGEQVE
DDADRIHKRAEDLEQFIRDTLLGAKDLQSKAAELNKTLSRNDGTPDKSLSKMKGEVQAML
AEMRKRQLGGMKSIAEEEKDLAEELYQKVKRMFGDPHQATEDLKAEIKEKLSDHEGKLQE
AQDLLNSARGKARQAGLLTEKNKANLTALQRKRDAVNAVKQDAQKVLGEGNDLLDEANQL
SDNINKELEDLEEMDRELDPLHAQLDDEVQGLSDGLSNGRLAEHVREAEEHAKQLNESAA
ILDGILAEAKNLSFNATAAVHAYSNIKANVDAAEKEAKAAKQTANEALALALGPDVPVKE
AAQNALQKSQILLNKAKQLQNDVKENADNVAGLKGRVKAARDKTKGLLAAVNGTLATLNA
IPNDTSAKLAATKAVAADANATAVDVLERLADLNLRLGGLTLNCSELEDDVNAANRLIQD
PEKNTIIHAAGAKVKDLEDEADRLLEKLQPIKELQDNLRRNISQIKELINQARKQANSIK
VSVSSGGDCLRSYRPDIRKGRYNTIILHVKTTTPDNLLFYLGSAKYVDFLALEMRKGKVN
FLWDVGSGVGRVEYPHHTINDGNWHRIEASRNGLNGTISVYPLEGPMAGMMPTPASANSP
TAYTILDVDQNAYLFVGGILGTAKKAEAVRASTFIGCMGETFLDGKPIGLWNYREREGDC
KGCVVSPQRTDGEGTVQLDGEGYAAVGRPTRWNPNVSTITFKFRTFSSDSLLMYLATEDM
KDFMSLELSEGKVRVNFDLGSGVGRAVSAKRHNDGRWKALTMSRNKKQATVIVVDIDDGA
EEKIVAISQGSATGLNLKENQKIYFGGLPTIGNYSMAARSEVNLKRYAGCLRDIEVSRTP
YNLLSSTDYTGVTKGCNVENLYTVSFSKPGYMELGGPSLEVGTEISLSFSTLSDSGIILL
AVGGASPISPSQVRRSNLSSKRRRRQSGEPYLSVMLNKGSLEVLINTGSHSQRRVVRRPD
QGNLSDGREHSLRIERLPGRSFAVQVDEEPKREASLPNDQPIRLQRIFLGGIPADVEQTS
NRVNVPFQGCIWNLMVNSVLSDFSRPVSFENAEIGQCPNLAPPPPPIPEEEEKKVDSKPV
QPPLTPAPAKPRPGRPDEATPPAPAAATPTPPAAVAPPTSQPDPGSDMDSCASAVAPTSL
EKAYQFGLTRNSHMSFAFDDTKVRERLILEFELRTKELSGLVLYMARINHADFVSIQIKE
GQACLGFDLGHGNISDCVPFSINDGNWHKIRVQRTKQRGVLAVEGRYMKQMFSPKTADLL
DVVGKVYVGGLPQNYTTKRIGPILYSINGCIRNFTMGGSPVSTKSAVTGRTEVISEDFKL
DMAAPTSSYMVGRCFVSTETGTYFDGTGYLKAVSSYRVGLDVSIAFEFRTSKTSGVLLAV
SNQANDGLGLEIVDGKLLFHVDNGAGRITAKHVPEGRSFCDGQWHSVTANKLRHRLELVV
DGVKSQAQSPNARSNTCDTNDPIYVGGYPAGVRQAALSTRSSFRGCMKSLKITKASKTMD
VQFNKALEIKGVQPLSCPAGAA
NT seq
9789 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtactacttctttccctactggtgcttatcgacgcgttgctatggcaatgc
tgccatacccagcagagaggactgttcccagcggtgctgaatctggctacaatggcagac
ataacaactaatgctacctgtggcacaaatggaccagagatgttctgtaagctggtggaa
catgttcctggtcagcctgtgaggaacccgcaatgtcgaacctgcaaccaacggagtaca
aactcatttgagcatcatcctattgaatatgccatagatggaaccaaccgttggtggcaa
agtccttctattatgaatgggatggaataccactatgtgacagtcacactggacttgaaa
caggttttccaggttgcttatgtgataatcaaggcagccaactcacctcgtccaggtaat
tggatcttggagcgttcaatagatggcgtgacctttgaaccttggcagtactacgcgatc
acagacacggagtgtctgacgaggttcaacataaatccacgaaccggaccgccatcctac
accagagatgatgaagtgatctgtacgtcgttttattcaaaggttcatccactggagaat
ggagagatccatacgtctctgatcaatgggcgacccagtgcagatgatccctctcccacc
ctgctaaacttcacctctgcccgctacatcaggctggtgttccagcgaatacgaacgctg
aacgctgacctaatgactctgacacttagcgaccccaaagatatcgatcccattgtgaca
agacggtactattattccattaaggacatctcggttggaggaatgtgtatctgttatggc
catgccaaagcctgtccactcaactctgctacgaagaagtttagctgtgaatgtgagcac
aacacatgtggggagagctgtgatcactgttgcccgggttaccaccagcagccatggatg
gcgggaaccttcctcactagacacgtttgtgaaaagtgcaactgcaataataaggcagag
gagtgcttttttaatcagactgtagctgacctgtccttaagcctcgacactcacggtcag
taccgaggtggtggcgtctgtattggttgccgtgacaacacagctggaatcaactgtcaa
agctgcattcctggttactacagacctacaaaggtgggtgcagatgaagaggacccctgc
atcccttgctcttgtgatccacatggttctattagtcagacttgtgttgcagaagaaagc
caagcttcgcccggtcagccagcagggtcatgctggtgtaaggaaggtttcgggggtctg
cgatgtgacagatgtgctgttggttataaagactacccaacgtgtgagcgctgtaattgc
agagtggaaggaagcatcaacgctgacccgtgtgtaacaccgtgtatatgcaaggaaaat
gttgaaggagagaactgcgatcggtgtaaacttggtttctacaacctgcaacaagataat
cgacgtggctgtgaaaagtgtttctgtatgggtattgcaagtcagtgctctccttcaact
tggagctttgagaatgtgaccacgcttgctggctggcatccggttggagagacaggaggg
agggtgtggtctgttcacagagagacaccttcatatctgaccatcagacacttggatgtt
gtgaacgatcttggctccgcctactactggaacgcacctgaaatatatcttggaaacaag
gttgcagcctacggaggtgatgtgacgttcacggtgtcatacaaaacaaaccaacaagcg
gccatcagagtcacctcagagcctgaccttattattgagggaggtggaatgaagcttata
gacagctggtttggccagccagtgtatccgtcgtctaccagcaccaaacacattattctc
cttcctgagaacttcgtggtttcagagacaagacaggcgatcagcagaagagatttcctg
ttagtgctggccaacctgacgagtttaatggtgcgggcctcatacagcacggaaaccagt
gctgtctacaggctccattcattctcaatgcaggtggcaaatcctttagccactggaaag
agagcatcagctgtagaaaagtgtgcctgtccccctggatatggaggattatcctgcgag
acatgccctcctggttttcggcgagtctacggaaaactgtataatggtgtgtgtgaacca
tgccgctgtcatagacacagctcacattgccatgagttcacaggacattgcctggactgc
acccaccatactactggccaccattgtgacacctgcctacctggttactatggcaatgcc
acccatgggacacctcaagactgtcagccatgtgcctgcccacttaatcttcccagcaac
aacttcagccccacatgccaccttggtgacaaaggagagctgctctgtgatcagtgtcag
cctggatatacagggccaagatgcgacagctgttccagtgggtactacggccagcctgct
gcacccggaggatcctgccaaccctgcatttgcaatggcaatctggacctctccataccc
aatagctgcgatgcaatcacaggccagtgtttgaggtgtcgtcaaggttacaatggtgtg
acttgtgacagctgcgctgaaggctactatggggatgccatgacattaaaaagctgccaa
ccctgtcaatgccacaccaatggttcagtatcagaagtttgtaacaaggagaatggtcag
tgccagtgccgagaaaatgtgattggacggcagtgcgataagtgcatgcctaactgctgg
tgggatgctgagctgcaggagtgtatgccctgtcgctgcagtccttatggctccatctct
cagcgctgcgacactgagggccgctgcatctgccgccccggcttcatgggccgacgctgt
gaccttcgtcgcctaggttacgaaaggcgggagacacggcgccctgtagagcgtgttccc
ctggaagctgtgcagcagaggtgggggggaacctcccgcacaacagggggttgtcccagg
ggagcgtacagacctcagacagggcctcaaactcacggcgttacgacaggcggggtgtgt
atcccgtgtcactgcaactcatacggctcaaagtcatttgactgtgatgaaaagggtcag
tgtcgctgtcagcctggagtcactgggcctaaatgtgaccgatgctcaagaggattcttc
aacttccaggagggtggctgcacaccttgccagtgcagtcatgtgggaaacaactgtgat
gcgaatactggacagtgtatctgtcctcctaacacaattggtgagaggtgtgaccgttgt
gcgcccaaccactggggccacgatatcacaactggatgtaaggagtgtggctgcaatgtg
atcggctcactgagccagcagtgcaacgccaacacaggctgctgcttctgtcgcgattcc
ttcagaggagagaaatgcgatgaatgtcaaatcgggtacagagacttccctcagtgcatc
cagtgtgagtgcagcgtcgcaggatcggacagccagacctgtgacctggagagaggagtg
tgtgcctgtgcagaccgaacaggaaaatgtggctgcaagcaaaatgtggaagggcacaac
tgtgatcgctgtaaaacagatatgtttggcttatctgcgaaaaatcctcttggctgcagc
aagtgctactgctatggactgactcactcatgcatggaggcacaaggacttataaggatg
tggttgacactgaggccagagcagacagtgctccccctggtggacaaatccaacactgtg
gagaagagggcgggagtgagcttccagcacccagagatactggctcatgcagaagtggtc
acaacaactctgtctgaaccgtactactggaagctgccagagcagttcacaggctctatg
atcacagcctacggaggacaactgaaatacgctgtgtactacgaagccagagacgaaacc
ggtccttcgtcatatgagcctcaagtcattattaaaggtggtccaaaccataatatcata
ataacacggcacatcccaggacttcagattggtcagctcacccgtcatgagatcgacatg
acagagcatgaatggaagtttgcagatggccggtctatgagtcaagaggacttcatggac
gttttgttctatgtggactacatcctgattaaggcttcatatggcaatctgatgagacat
agccgtatttcagagatcagcttaaccgtagcagaggaaggaacaccaacggagcaaaac
gagaaagcccatcagatagaaaaatgtgactgtccaactggatactctgggctttcttgt
gaggagtgtgctgcaggtttctatcgtctccgcgctgggtcgcctgtttctgttccagca
tccaggttgccaacagctgccggcatgggcagctgtgttcagtgtcagtgcaatgggcat
tcctccacttgtgaccctgagacatccatatgccagaactgtcaagacaacacggagggg
gatcactgtgaacgctgcgctccaggtttctacggtgtggtccgaggttctccagatgac
tgcaaaccttgtgcctgccccctttccaatgcagagaataatttcagccctacatgtgtg
gcagaaggtttcagtgactaccgctgtacctcctgtgctgagggatatgagggaaaatac
tgtgaaaggtgtgccactggttaccacggtaacccaaggatgccaggtggtcgctgtgag
gagtgtaagtgtacctcgtggggttcgttaccaggaccatgtcaccctgtcacgggccag
tgccgttgcagggttgggacatctggaattttgtgtgaccagtgcatggatcggcatgtg
tgtggaccgtctgggataatctcctgtgacgatgagtgctcaggtttgctaataagcgac
atggaccgtctctatcgcatcatcactgatgtcacactgaccacacccctcccgccacct
tataaagctttgtaccactttgaaaacatgacagaggagctcaagcacatgttatcgcct
cacaaagctccggagagattactgcaactggccgactccaacctgggatcactggtcgtt
gagatggaccagctacacagcagggcaaccaaggtatctgctgatggagagcaggtggag
gacgatgcggacaggattcataaacgtgctgaggacctggagcagttcatcagagacact
ctgctgggagcgaaagacctccaatccaaggcagctgagttgaacaagacactctcacgg
aatgatggaactccagacaaaagccttagcaagatgaagggggaggtccaggcgatgcta
gccgagatgagaaaacggcagcttggagggatgaaaagcattgcagaggaagagaaagat
ctagcagaagagctgtatcagaaagtcaaaaggatgtttggtgaccctcatcaagccact
gaagacttgaaagcagagataaaagagaagctgtctgatcatgaggggaagctccaggag
gctcaagatttactgaactctgcccggggaaaggcgaggcaggctggcttgctgacagaa
aaaaacaaagccaacctcaccgctctgcagaggaagcgagatgcagtcaatgctgtcaaa
caagacgcgcagaaggtccttggagagggaaatgatcttctagatgaggcaaaccagctg
tctgacaacatcaacaaggagctggaggacttggaggagatggatagagagcttgatccg
cttcatgctcaactggatgacgaagttcagggcctctctgatggcttgagcaatggccgc
ctggctgaacacgtccgcgaagcagaggaacatgccaaacagctaaatgaatcggcagcc
attttagatggtattttggctgaagcaaaaaacctgtccttcaatgcaactgctgctgtc
catgcttacagtaatattaaagccaatgttgatgctgcagaaaaagaggcaaaagcagcc
aaacagacagcaaatgaggctctggcactggctttgggtcctgatgtccctgtaaaggag
gcagctcagaatgccctccagaagagtcaaatactgctgaacaaagccaaacaacttcag
aatgatgttaaagaaaatgcagacaatgtggccgggctaaagggcagagttaaagcagct
agagacaaaaccaaaggccttctagcagctgttaatggaaccctggcgacactcaacgca
atccccaatgatacgtctgctaaactagcagctacaaaagcagtagcagctgatgccaat
gctacagccgtagacgtcctggagcgccttgcggatctgaacctgcgcctcggaggcctg
acgctgaactgcagcgagctggaggacgacgtcaacgcagccaatcggctgatccaggac
cctgaaaaaaacacaatcatccatgctgctggagctaaagtaaaggatttggaggatgaa
gctgacagactgctggagaagctgcaaccgataaaagagcttcaagacaatttgaggcgc
aacatctcacaaataaaggaactgatcaaccaggccaggaagcaagcaaattcaatcaaa
gtctcagtttcatcaggtggtgactgcctccgaagttatcgccccgatatcagaaaaggg
aggtacaacaccatcatccttcatgttaaaaccaccacacctgataacctccttttttac
ctgggatctgccaaatatgttgatttcttggccttggagatgcgcaaggggaaggtgaat
ttcctttgggatgtgggttcaggtgtgggaagggttgaatatccccatcacacaatcaac
gatgggaactggcaccggatagaagcgtctcgtaatggtctaaatggcaccatatcggta
tatcccttggaaggccctatggctggcatgatgccaaccccagccagtgccaactcacct
acagcttacaccatcttagacgtcgaccagaatgcctacctgtttgttggaggaattttg
ggcactgcaaagaaggcagaagcagtcagagcatcaacatttataggctgcatgggagag
accttcttggacggtaaacctatcggtttgtggaactacagagagagagagggagactgt
aaaggttgtgttgtcagtcctcagcgaactgatggtgaggggacagttcagctggacggt
gaaggctacgctgcagtaggacgacccacaaggtggaacccaaatgtttccaccatcacc
ttcaagtttcgcactttctcctccgactctctgctcatgtatctggccactgaagacatg
aaagactttatgtctcttgaactgtcagaaggaaaggtgagggtgaattttgacctggga
tcaggagttggaagagccgtatcagctaaacgccacaatgatggacgctggaaagctctc
accatgtcgaggaacaagaaacaggccactgtgattgttgtggacatcgatgatggtgct
gaggaaaagattgtggccatatctcagggctcagctactggtcttaacctgaaggaaaac
cagaaaatctattttggtggtttgccgacgattggaaactacagcatggcagccaggtca
gaggtgaatctcaagaggtacgcaggttgtctcagagacatagaagtctccagaactcca
tataatctgctcagcagcactgactatacaggagtcactaaaggatgtaatgtcgagaac
ctatacacagtgagtttcagtaagccaggatacatggagctgggtggcccgtctctcgaa
gtcggcactgagatcagcttgtccttcagcactctgtcggactctgggattatactgctg
gcagtgggaggggcttcacccatcagcccatcacaggttcgcagatcaaacttaagttcc
aagagaagacgaaggcagtcaggagagccctacctttctgtcatgctgaacaaaggctct
cttgaggttctaataaataccggcagtcatagtcagcgtcgcgtcgtcagacgacctgac
caaggaaacctgagcgacggcagagagcattcgctacgcatagagagactgcctggcaga
tcctttgcagtccaggtggatgaggaacccaagagggaggcgtcgctccccaatgaccag
ccaattaggctgcagcgcatcttcctcggtggtattccagcagacgtggaacagacatcc
aacagagtcaatgtcccattccagggatgcatatggaaccttatggtcaattcagttctt
tcagatttctccaggcccgtttcctttgaaaatgccgaaattggccagtgtccaaacctt
gctccacctcctcctccgataccagaagaggaggaaaagaaggtggactcaaaaccagtc
caacctcctctcaccccagctcctgccaaacctcgtcctggtcgcccagatgaggccacg
ccccccgccccagctgctgccacacccaccccgcctgctgctgtagcaccacctacttct
caaccggatcctggctcagacatggactcgtgtgcatcagctgtggctccgacgtcgctt
gaaaaggcatatcagtttggactgaccagaaacagtcacatgagcttcgcttttgatgac
accaaagtcagagagaggttgattttggagttcgagttgaggaccaaggagctttctggt
cttgtgctgtacatggcaagaataaaccatgcagattttgtttctatacagatcaaggag
ggacaagcctgtcttggatttgatcttggtcatggaaacatctctgattgtgttcctttc
tctattaatgatggtaactggcacaagatccgagtgcagcgcactaagcagagaggtgtg
ctagcagttgaaggtcgatacatgaaacagatgttcagtccaaaaacggcggacctttta
gatgtggttggaaaggtgtacgttggtggattaccgcagaactacaccaccaagagaatt
ggcccaattctctatagtatcaatgggtgcatccgtaacttcacgatgggtggaagtcct
gtgagcaccaagtcagctgtaaccggtcgtactgaagtgattagtgaggactttaaactg
gacatggctgcaccaacctccagttacatggttggaaggtgttttgtatcaactgaaacg
ggaacctatttcgatggcactggatatctgaaagctgtttcctcctatagggtgggtctg
gacgtgtcgattgcatttgagtttcgaaccagcaaaaccagcggagtccttttggcagtc
agtaaccaagccaatgatggactcggtttggagatcgtcgatggcaagctccttttccat
gtcgacaacggagctggccgaatcactgcaaagcatgtgcctgaaggcaggagcttctgt
gatggccagtggcacagcgttactgccaacaagcttcgccaccggctggagctggtggtg
gatggagtaaagagccaagcacagtctcccaatgctcgctccaacacctgtgataccaac
gatcccatctatgttggaggatatcctgctggagttcgccaggcagctctttctacccgc
tcatccttcagaggttgtatgaaaagcctgaagatcactaaagcatctaagaccatggat
gtgcagttcaataaggccctggagattaaaggagtccagccactatcctgtcctgccgga
gctgcctaa
DBGET
integrated database retrieval system
