Xiphophorus hellerii (green swordtail): 116733868
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Entry
116733868 CDS
T07363
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116733868 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116733868 (hnrnpu)
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
hnRNP proteins
116733868 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
CPT
AAA_22
Zeta_toxin
AAA
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
116733868
NCBI-ProteinID:
XP_032440658
LinkDB
All DBs
Position
15:complement(21733809..21748198)
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AA seq
817 aa
AA seq
DB search
MSTINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALAGDTSAAQEDSVDDG
FDQSVDQEGMGEEEEGEGEGEGPVEESMEANEEEAENEDDGNGVAEDEEMGEGEDGGDGD
EDDEMDPMLKADVDDMEKIEDGEPGDNAAEGDADKDTNADQKNKKGVKRRREEHGRGYFE
FIEENKYSCASFKSPVPPLEEEDEECDETKVCLDTYNCDLHFKVSRDRYSASSLIMESFA
YLWSGGKGTYGVNSGKACFEMKLTEKISVKHISSKNLEIHDVQVGWSLSTGTLLLGEEEF
SYGYSCKGKKTTNCVTEDFGETYEENDVICCLIDFEGEEVVLSFAKNGEEPAVAFRVRKD
CLNGQALFPHVICRNCAVEFNFGQMETPYFPTPEGYTFLQQIPVSERVRGLKGPQTKADC
EIIVMVGLPGSGKTTWVKNQVQQNPGKYYILSSDTIVDKMMINSLKRQSKDITKLSAISQ
RAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVFPTDEEYKMRV
QKKVESDGKEVPEHALLKMKGFYALPEEGESFSEVTYAELPKDDAAKLLEQYKEESKTAL
PAEKKPNQGSTTPKRGGSGGGGPRGSGRGGKNQFGRSGQGQRGGGGRGGFQNRGNFRGGP
GPRGGFNRPPRGFLPPPAFRGGFPRPGSFGRGGGPIPSLAGSPRGGPMRGGMGLRGGPMN
RGGQMNRGGQMSRGGQMNRGGGNMNRNANRGPPPHFQQRGGGRGNFGQKNSNYGNNRNSG
GFGNRNGMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccattaacgtgaagaagctcaaagttaacgagctgaaggacgagctgaaaaaa
cgaaatctctcggacaaggggctgaaggccgagctgatggatcgcctgcaggccgcgctg
gacgaagaggccctcgccggggacacctcggcggctcaggaagactcggtagatgatggg
ttcgaccagtctgttgaccaagagggaatgggagaagaagaggaaggagaaggcgaaggc
gaaggcccagtagaggagagcatggaagccaacgaggaagaagcagagaatgaggacgac
ggcaacggcgtcgccgaggacgaagaaatgggtgagggagaagacggaggggacggggat
gaggacgatgaaatggatcccatgctcaaggcggatgtggacgacatggaaaaaattgaa
gatggtgagcccggagacaacgctgcagagggggatgcggacaaagacacgaatgctgat
cagaagaataagaagggtgttaagagacgccgggaggaacatggaaggggctactttgag
tttattgaagagaacaaatacagctgcgcctcttttaagtctcccgtaccaccgctggag
gaagaagacgaagagtgtgatgagaccaaagtctgcttggacacctataactgtgacctg
cactttaaggtgtcccgagaccgctacagcgcttcatcgctcatcatggagagctttgct
tatctgtggtctggaggaaagggaacctatggggtgaactctggcaaagcttgctttgag
atgaagctcacagagaagatttcagtgaagcacatttccagcaagaacttggaaatccat
gatgtgcaggttggatggtccttgtcaactgggacgctgctgctgggtgaggaagagttt
tcctatggttactcctgcaaagggaagaagaccaccaactgtgtgactgaagactttggg
gaaacgtatgaggagaacgatgtcatctgctgcctcattgactttgagggcgaggaggtg
gtcctgtccttcgccaagaacggtgaagaaccagccgttgctttcagggtccgcaaggac
tgtttaaatggccaggccctattcccacatgtcatctgtcgcaactgcgctgtggagttt
aactttggccagatggagacgccgtacttcccgacgccggagggctacaccttcctgcag
caaatccccgtcagcgagcgagtgagggggctgaagggaccccagacgaaggccgactgc
gagatcattgtgatggttggtctgcctggctctggcaaaactacatgggtcaagaaccaa
gtccagcagaaccctgggaagtactacatcctgagcagtgacaccattgtggacaagatg
atgatcaacagtttgaaacgccagtccaaggatatcaccaagctgagcgccatttcccaa
agagctccactgttcctgggcaaattcatcgagatcgctgctcgcaagaagaggaactac
attctggatcatactaacttatccgcgccaggccagaagaggaagatgtgtctgtttgct
ggcttccagcgtaaggctgtggtcgtcttccccacagacgaggaatacaagatgagggtc
cagaagaaggtggagagcgatggcaaagaagtgcctgagcatgcgctgctcaaaatgaaa
gggttctacgccctgccggaagaaggggagagcttcagcgaggtgacgtatgctgagctg
ccaaaggacgacgccgccaagctgctggagcagtacaaagaggagagcaagacggccctg
cccgctgagaagaaacccaaccaggggagcacgactccgaaaagaggcggcagcggagga
ggcggccctcgcggcagcggccggggaggcaagaatcagttcggccgcagcggacagggg
caaaggggcggtggcggacgtggaggcttccagaacagaggcaacttcagaggaggcccc
ggcccacgcggcggcttcaaccgtcctcctcgcggctttctacctccaccagccttcagg
ggcggcttcccccggcccggcagcttcggccggggcggcggccccatccccagcctggcc
ggatccccaagaggcgggcccatgaggggcggcatgggactccgaggaggacccatgaac
cgtggcggccaaatgaacagaggaggtcaaatgagccgagggggtcagatgaacagaggt
ggaggcaacatgaaccgcaatgccaatagggggccccccccccacttccagcagagagga
ggcggccgtggaaactttgggcagaagaacagcaactatggcaacaataggaacagcggg
ggctttggcaacaggaacggcatggacaaggctcaagccttcaaccagagctggcagcaa
gggttctggaaccagaaaccttggagccagcagtaccagcctggatattactaa
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