Xiphophorus hellerii (green swordtail): 116734102
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Entry
116734102 CDS
T07363
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116734102
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116734102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
PhoH
Motif
Other DBs
NCBI-GeneID:
116734102
NCBI-ProteinID:
XP_032441153
LinkDB
All DBs
Position
15:4900140..4909709
Genome browser
AA seq
1330 aa
AA seq
DB search
MNAGHLPPKTRLGVEDERQGEAQRTNLQKADSSECEPTWKPLKNKRSKDFDLDFSASPCK
THLEQEHESKDSGTGPEPRLEPHGVSLKSDKSLQKPMDFKPPPSIKTRKTPASPVTCMSV
KSDSSMEIATQFKNRCQTFHHSVSQEFPDESGGESAKVQHQEELNSVFKMLEENLKTFMK
NELQKFQMILSSEYSEALENQEEEDERNAADQEQAKGSRETFLKLSLLFLRRMRKDDLAD
CLWNRTCATECTQNLKSSLRKRFCCVFEGLAKAGNPTLLNQIYTELYITEGGDGETNEEH
EVRQIEAASRRQRIQEKTVRQENIFKASSEKDKPIRTVMTKGVAGIGKTLLTQKFALDWA
ENRSNQDIQFIFPFTFRELNVLKHKRFSLVELVHHFFNESKEAQICRFNDFQIVFIFDGL
DECRLPLDFHKNEILTDVTESTSLDVLLTNLIKGKLLPSARLWITTRPAAANQIPPECVD
IVTDVKGFTDVQKEEYFRKRFMDQKQASMVISHIKMSQSLRIMCHIPVFCWISATVLENR
QGRELPKTLTELYIYFLLVQSKVKQLKYEGGAETDLTWSPDSKKMIESLGKLAFDQLQKG
NLIFYETDLTGSGIDIKAASIYSGVFTQIFKEESGIYQDKLFCFIHLSVQEFLAALHIHL
TFVNSGVNLLDDKQPKQRVSKAFKNQPDMRKLHQTAVDKALQSPNGHLDLVLRILVGLSL
PANQTLLRGLQTQTANTSQSNQETAEFIKKKISDGLSAEKSINLFHCLNELNDCSLVEEI
QQYLRSGSLCTRKLSLAQWSALVFILLSSEKDLDVFDLKKYSASEDALLMLLPVVKASNK
ALLSDCTLSEKTCEAISSVLSSQTCCLREVDLSHNDLEDVGMEALSSGMLGQQCGLESLR
VADCNLSQKSCETLSLCLRSKSFRLKSLDLNYNFLQDVGLKQLSDALKSPYCKLESISLS
ACSLSEQSCETLASALSSPSCKLRSLNMSHNNLGDSGVKRLCVELENKHCQMETVILCGC
QLSERCCKYISAVLSTQPSRLRELDLSNNNLTDAGVQQLSSGLGSPHCKLETLRLSGCLV
TGKGCGYLASALSSNPSPLKELDLSYNHPGVVGKQMLSSEQKDPLWKLANLSLEQGGEHR
LKPDVRKYFCELELDMNSVNRQLHLSDNNTKIRQVDDEQPYPDHPNRFQTCWQLMCRNGL
TGRCYWEVEWKGAVLLSVSCKGIKRSGKSEACRFGRNDQSWTLECSDVFGFAAWHVNRET
TIPGSSAAHRVGVYLDHPAGMLSFYHVSSDTLKHLYTFCATFTEPVYPSFGLWSGASVSL
CSAASKKPAA
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctggacatttgccacctaaaacacgtcttggtgtggaagacgagcgtcagggt
gaagctcagagaacaaacctacaaaaggcagattccagtgaatgtgaaccaacctggaag
ccactgaagaataaacgttcaaaagactttgatttagattttagtgcctcgccttgtaag
acgcacttggagcaggaacacgaaagcaaagactctggaactggaccagaaccaagactt
gaaccacatggtgtgtctttgaaaagtgacaaatctctccagaaaccaatggatttcaaa
ccaccaccttctataaaaacccgtaaaactccagcctcccctgtaacctgcatgtcagtg
aagagcgactcttccatggagatcgcaacacagtttaaaaacagatgtcaaacttttcat
cacagcgtcagccaagagttcccagatgaatctggtggtgaatctgctaaagtccagcat
caagaggagctaaactctgtatttaagatgcttgaggaaaaccttaagacttttatgaaa
aacgagctgcagaagtttcagatgattctgagttctgaatattcagaagctctagaaaat
caggaggaagaagatgagagaaacgctgcagatcaagagcaggcgaagggcagcagggag
acatttctaaaactatcgctcctgttcctgagaagaatgaggaaagacgacctggccgac
tgtttgtggaacagaacctgcgcaacagaatgcacacaaaacctaaagtctagcttgagg
aaaaggttctgctgtgtgtttgaggggctcgctaaggcaggaaatccaacactgttaaat
cagatctacacagagctgtacatcacagagggaggggatggagagaccaatgaagagcat
gaggtcaggcagatcgaagctgcatcaaggaggcagcgtattcaagaaaaaactgtcaga
caggaaaacatctttaaagcttcatctgaaaaagacaaaccgatcagaacagtgatgact
aaaggagttgctggaattggcaaaacactcctaacgcagaagttcgctctggactgggca
gaaaacagaagcaaccaggacatccagttcattttccccttcactttcagagaactcaat
gttctaaaacacaaacggttcagtttggttgaacttgttcatcacttctttaatgaatcc
aaagaagcacaaatctgcagatttaacgacttccaaattgtgttcatatttgacgggttg
gatgagtgtcgacttcctctggacttccacaaaaatgagatcctgaccgacgtgaccgag
tccacctcactggatgttctgctgacaaacctcatcaaggggaaactgcttccctccgct
cgcctctggataaccacacgccccgcagcagccaatcagatccctcctgagtgtgttgac
atagttacggatgtaaaagggttcactgatgtacagaaggaggagtacttcagaaagagg
tttatggaccagaagcaggctagcatggtcatctcccacatcaagatgtcacaaagcctc
cgcatcatgtgccacatcccggtcttctgttggatcagcgccaccgttctggaaaacaga
caaggaagagagctacccaagaccctgactgagttatatatctacttcctgctggttcag
agcaaggtaaagcaactgaaatatgaagggggagcagagacagatttaacctggagtcca
gacagcaagaagatgattgagtctctggggaaactggcttttgatcagctgcagaaagga
aacctgatcttctatgaaaccgatctgacaggatctggcattgatatcaaggcggcttca
atttattcgggagtgttcacacagatctttaaggaggagagtgggatttaccaggacaag
ttgttctgcttcatccatttgagtgttcaggagtttctggctgctcttcacatccatctg
accttcgtgaactctggtgtcaacctgctggatgacaaacagccaaaacaaagggtatct
aaggcctttaaaaaccagcctgatatgagaaaactccaccaaactgctgtagacaaagct
ttacaaagtccaaacggtcaccttgatttagtccttcgcatactcgtaggtctttcactg
ccagccaatcaaacgctactccgaggcctgcagacacaaacagcaaacacctcacaatca
aatcaggaaacagctgaattcatcaagaagaagatcagtgatggtctgtctgcagagaaa
agcatcaacctgttccactgtctgaacgaactgaatgactgttcccttgtggaagaaatc
cagcagtatctgagatcaggaagtctttgcacacgaaaactgtctctggctcagtggtcg
gctctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaa
tactcggcttcagaggacgctcttctgatgctgctgccagtggttaaagcctccaacaaa
gctctgctaagcgactgcaccctctctgagaaaacatgtgaagctatatcctcagtcctt
agttcccaaacttgctgcttgagagaagtggacctgagtcataatgacctggaggacgta
ggaatggaagcgttgtcttctgggatgttgggtcaacaatgtggactggaatcactgagg
gtagctgactgcaacctgtcacagaagagctgtgagactctttccttatgtctccgttca
aagagcttcaggcttaagagtctggatttgaattacaacttcctgcaggatgtcggactg
aagcaactttctgatgcattgaagagtccatactgcaaactagaaagtattagtttgtcg
gcatgcagcctctcagagcagagctgtgaaactctggcctcagcgctcagctctccctcc
tgcaagctcagatccctgaatatgagccacaacaacctgggagattcgggggtgaagcgg
ctctgtgttgaactggagaacaaacactgtcaaatggagaccgtcatactttgtggatgc
caactctcagaaagatgctgtaaatatatatctgcagttctcagcactcagccatccaga
ctgagagagctggacctgagtaacaacaatctgacagatgcaggagtgcagcagctgtcc
agtggcctgggcagtccacactgcaagctggaaactctcagactgtcaggctgtctggtc
acagggaaaggttgcggctatctggcatcagccctgagctccaacccctctcctctgaaa
gagctggacctgagctacaaccatccgggagtcgtagggaaacaaatgctgtcttctgag
cagaaggatccactgtggaaactggctaatctgagtttggagcaaggcggagagcacagg
ctaaaacctgatgtcagaaagtatttctgtgaacttgaactggacatgaattcagtgaac
agacaactccacctgtctgacaacaacacaaagattagacaggtggatgatgagcagcca
taccccgatcatccaaacagattccagacctgctggcagctcatgtgccgaaatggcctg
actggtcgctgttactgggaggtggagtggaagggagcagttctcctctccgtgagctgc
aaaggaatcaaacgaagtggaaaaagtgaggcctgcaggtttggaaggaacgatcagtcc
tggacgttggagtgctctgacgtgtttggtttcgctgcctggcatgttaacagagaaaca
accatccctggttcctctgccgcccacagagtaggagtttatctggaccatcctgcagga
atgctctccttctaccatgtctcctccgacacattgaagcatctctacaccttctgcgcc
acatttactgaacccgtttatcccagttttggtttgtggtctggagcctcagtgtcactg
tgttcagcagcttcaaagaaacctgcagcttaa
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