Xiphophorus hellerii (green swordtail): 116734241
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Entry
116734241 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 8-like
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116734241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116734241
Transporters [BR:
xhe02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
116734241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_29
nSTAND1
AAA_23
DEAD
TraD_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
116734241
NCBI-ProteinID:
XP_032441402
LinkDB
All DBs
Position
2:complement(17144144..17211226)
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AA seq
1618 aa
AA seq
DB search
MISRYKPSPGSTMSLAFCGSENNSSAYNVDRGVLNNGCFLDALNVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFVLLFILVCEIAEGIVSDGFTVSLHLHLYM
PAALAFMAGITSIVYYHNIETSNFPKLLLALLIYWVLAFIMKTIKFAKYTEHGIGPRQLR
YCITGLLVLLYGLLLAVEINVILGRRYMCFANPTEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYIKLRQEFEEQKKPQGIAPQGPKWIW
LALRKAFGRPLILSITFRIMADLLGFAGPLCISGIVHHISKDNRTIQQPMKLLGIYFISS
KEFLENAYVLAVLLFIALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMS
MGELTVAQICNLVAIDTNQLMWFFFLCPNLWAMPVQIILGVILLYYLLGISALIGATVIA
VLAPVQYFVATKLSQTQKNTLEYSSERLKKTNELLRGIKLLKLYAWEHIFRDSVEETRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGEEQEPKATMSSGCSNHNQNRYQAVSSSK
PFPSSSSSFLSRYFQPLKVVNRKRPPRDEWNNYSSQGDQEGDGPSQEVDQDICIKITSGY
FTWTDGPPTLSSVDIKIPFGKLTMIVGQVGCGKSSLLLAALGEMQRVSGTVIWNSMPILE
SEGDESPTDREAVAGDQDIRKRCPVAYASQKPWLLNSSVVENITFEMPMIKSRYKAVIEA
CSLQPDIDILPQGDQTEIGERGIILSGGQKQRISVARALYQQTNVVFLDDPFSALDIHLS
DHLMQDGILNLLREEKRTVVLVTHKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSEPELF
RQWKTLMHRQDREFETETVAENMTDLERKNLRRAMYSREALRTEEDEEEESLDSEDDDNL
SQVMRQRATIPWRSCGTYLSSAGLLLLTLLLLSQLLKHSLMVAIDYWLAHWTSHVITAKI
DASAHNCTLVKDCGFSHSWYLSVFSVLCCLGIVLCLATSVTVEWTGLKVAKKLHHNLLNK
IILAPMRLFETTPLGSILNRFSTDTNTIDQHIPTTLECLSRSTLLCLSALGVISYVTPVF
LIALLPLAVACYFIQKYFRVASRDLQQLEDATQLPLLSHFSETVEGLSTIRALRYEPRFR
QRLLQFTDANNIASLFLTAANRWLEVRMEYVGACVVLVAAVASITNSLYNQLPPGLVGLG
LTYALMVSNYMNWMVRNLADMEVQLGSVKRINGLLKTEPENYEGLLSVSQVPDGWPRQGE
IKIQNLSVRYDTTLKPVLKNVNAHVHPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIV
IDNIDISKLPLQTLRSRLSIILQDPFLFSGTIRFNLDPEMKATDEMLWEALEIAQLKPVV
KTLPGGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVV
MTSFADRTVVTIAHRVHTILNADLVIVMKRGIILEYDRPQALLDREDSVFASFVRADK
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgatacaaaccgagccccggatccaccatgtccttggctttctgtgggagt
gagaacaactcgtcggcctacaatgtggacaggggcgttctcaacaacggctgcttcctc
gatgcactcaacgtggtcccacatgtttttctcctcttcatcacttttcccatcctcttc
attggttggggcagccagagttcaaaggttcacatccatcacagcacctggcttcacttt
cctggacacaacctgcgctggctccttaccttcgtcttgctcttcatcctcgtctgtgag
attgcagaaggcatcgtctccgacgggttcaccgtgtctctccatcttcatttgtacatg
cctgcagctctggccttcatggctggcatcacatcgattgtctactatcacaacatcgag
acctccaacttcccgaaactgcttttagccctgctgatctactgggtgctggctttcatc
atgaagaccatcaagttcgcaaagtacactgagcacggcatcggccctaggcagctccgc
tactgcatcactggacttctggtgctgctttatggactcctactggctgtggagatcaac
gtcatactggggaggcgctacatgtgtttcgccaatccgacagaagtgaagcccccggaa
gacctccaggacctcggcgttcgtttcctgcagccgtttgtcaacttgctgtctaaagcc
acctactggtggatgaacacgttcatcacgtcggctcacaggcggcccattgacctgaag
gtcatcggcaaactccccatcgccatgcgggcgctcaccaactacataaagctccgccag
gaatttgaagagcagaagaagcctcagggcattgcacctcaaggtccgaagtggatctgg
ctggctttgaggaaagctttcggcaggcctctcatcctcagcatcacgttccgcatcatg
gctgacctgctgggcttcgccggcccgctctgcatctctggcatcgttcaccacatcagc
aaagacaatcgtaccatccagcaaccgatgaagcttcttggcatctattttatttcatcc
aaagaattcctggagaatgcgtacgtgttggcagtgctgctcttcatcgctctcctcctg
cagaggaccttcctccaggcttcctactacgtcgccatcgaaactggaatcaacctgcga
ggagccatacagacaaaaatctacaacaaaatcatgcgcctgtgcacttccaacatgtcc
atgggagagctcaccgtcgctcagatttgtaacctggttgccatagataccaaccagctc
atgtggttctttttcctctgtcctaacctgtgggccatgccagtgcagatcattctgggg
gtgatcctcctctactacctcttgggaatcagtgccttgattggagccaccgtcatcgcc
gtgctagctccagttcaatactttgtagccacaaagctatcacaaacacaaaagaatacc
ctggaatactccagcgagcgtctgaaaaagacaaacgagcttctccgtggcatcaagctg
ctgaagctgtacgcctgggagcacatcttccgagacagcgtggaggagacgaggggcaag
gagctcaccagcctgcaggcctttgccctgtacacatcaatatctattttcatgaatgca
gctatcccgattgcagctgtgctgacgacgtttgtggttcacgtccatatttcagaggac
gctgacctgtccccagccgtggccttcgcctccctgtctctcttccacatcctggtcacc
ccgctcttcctcctctccagcgtggtgcgctccaccgtcaaggccctcgtgagtgttcag
aagctcagcgagtttttctcaagcgatgagatcggagaagaacaggagcccaaagcgacc
atgtcgtctggctgcagtaaccacaaccagaacagataccaggcagtgtcatcctctaag
cctttcccttcgtcgtcctcctcctttttgtcccgatacttccagccactgaaggtggtg
aaccggaagcgccctccgagggacgagtggaacaactacagctcacagggcgaccaggag
ggcgacgggccttcccaggaggtggaccaagacatctgcatcaagataactagtggttat
ttcacttggacagatggaccaccaacactgtccagtgtggacattaagattcccttcgga
aagctgaccatgattgtgggtcaggtaggctgtgggaagtcgtctctactgctggcagca
ctgggagaaatgcagagagtctctggaacagtcatctggaacagtatgcccatccttgaa
tctgaaggcgatgaaagtcccacagacagagaagcagtggcaggggaccaagacatcagg
aaaaggtgccctgtggcctacgcttcccagaagccctggctgctgaactcctctgtggtg
gagaacatcacctttgaaatgccaatgataaaatcaagatacaaagctgtcattgaggcc
tgctcccttcagcctgacatcgacatccttccacaaggagaccagacagagatcggtgag
cggggtatcatcttatcaggcggacagaaacaacggatcagcgtggccagagccttgtac
cagcagaccaacgttgtctttctggatgacccattttctgctttagacatccatctgagt
gaccatctgatgcaggatggcatcctgaatctgctgagggaggagaagaggacggtggtg
ctggtcacacacaaactgcagtatctgccacatgcggactggattattgccatgaaagat
gggacgatccagactgaagggactctgaaggatatccagaactctgaaccagaactcttc
aggcagtggaagaccttgatgcacaggcaggaccgggagtttgagacggaaactgttgca
gagaacatgacggatctggagaggaaaaacctgcggagggccatgtactccagagaagct
ctgaggacggaggaggacgaagaagaggaatccttggacagcgaagatgacgacaacctg
tcgcaggtgatgcgtcagcgagccaccatcccctggcgctcctgcggtacctacctgtcc
tccgccggcctcctcctcctcactctgctcctcctctcacagctcctaaaacactccctc
atggtcgccatcgactactggctggcgcactggacgtcacatgtcatcacggccaagata
gacgcctctgctcacaactgcaccctcgttaaggactgtggcttcagccactcgtggtat
ctgtctgtgtttagcgtgctctgctgccttggcatcgtcctctgtctcgccacctctgtg
accgtggagtggacgggcctcaaagtggccaagaagctccaccacaacctgctcaacaag
atcatactggcccccatgaggctgtttgagacgacaccgctcggcagcattctcaaccgg
ttttccacggacacaaacacaatcgaccagcacatccccaccaccctggagtgtctgtcc
cgctccaccctgctgtgtctctccgccctgggcgtcatctcttatgtgacgcccgttttc
ctcatcgccctgctgccgctggctgtcgcctgctacttcatccagaaatactttcgagtg
gcttcaagggacctgcagcagctggaggatgcaacccaactccctttactctcccacttc
tctgagacagtagaggggctcagcacgataagggctctcagatacgagcccaggttcaga
cagaggctgctgcagttcaccgacgccaacaacatcgcctcgctcttcctcacggccgcc
aaccgttggctggaggtccgaatggagtacgttggagcctgtgtggtgctggtggcagct
gtggcctcaatcaccaactctctgtacaaccagctgccccccggcctggtggggctcgga
ctcacgtacgctctcatggtgtccaactacatgaactggatggtgaggaacttggcagac
atggaggtgcagcttggctcagtcaagaggattaatggcctgctcaaaactgaaccggag
aattacgagggactcctcagtgtgtctcaggtgcccgatggttggcctcgacaaggagaa
ataaagatccagaatctgagcgtgcgctacgacactacgctaaaacctgtgctcaaaaat
gtcaacgcacatgtgcatcctggtcagaaggtggggatctgtgggagaaccggcagcggc
aaatcatctttctccttggccttcttccgcatggtggacatgtttgaggggaggattgtg
attgacaacatcgacatctccaagctgcctctgcagaccctcaggtcccggctgtccatc
atccttcaagaccccttcctgttcagtggcaccatccggttcaacctggacccagagatg
aaggcgacagatgagatgttgtgggaagctctggagatcgcccagctgaagcctgtcgtc
aaaaccttgccaggaggtctggatgccatggtaacggagggaggagagaacttcagccag
ggtcagagacagctcttctgtctggccagagccttcgtgaggaagagcagcatcctcatc
atggacgaagccacggcctccatagacatggcgacggagagcatcctgcagaaagtggtg
atgacctcttttgctgaccggacagtagtaactatagcacatcgagtccacaccatcctg
aacgctgacctggtgattgtgatgaagcgggggatcatcctggaatacgacagaccccag
gccctgcttgacagagaggacagcgtcttcgcctccttcgtgcgagcggacaagtag
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