Xiphophorus hellerii (green swordtail): 116734338
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Entry
116734338 CDS
T07363
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116734338 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116734338 (tbpl1)
03021 Transcription machinery [BR:
xhe03021
]
116734338 (tbpl1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
116734338 (tbpl1)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116734338 (tbpl1)
RNA polymerase III system
TFIIIB
116734338 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
116734338 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
UVSSA_N
Motif
Other DBs
NCBI-GeneID:
116734338
NCBI-ProteinID:
XP_032441550
LinkDB
All DBs
Position
15:complement(16362157..16369343)
Genome browser
AA seq
187 aa
AA seq
DB search
MDSNNDEALDIIVTNVVATFRTRCHLNLRKIALEGTNVIYKPEVGKVLMKLRKPMITASI
WSSGKIICTGATSEEEAKLGARRLARCLQKLGFKVRFSAFRVVNVLAVCSMPFAVHLVDF
TKNNRPIASYEPELHPAATYRIKNLKATVQVFSTGSLTVTGPNVQSVASAVEYIYPLLYE
CQKPRCK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggattccaacaacgatgaagcactcgacatcattgttacaaatgtggtggcaacattc
aggaccaggtgtcacctcaacttgcgcaagattgctttagaaggaaccaatgtcatctat
aagcctgaagtcgggaaagtgctgatgaaactccgtaaaccaatgataaccgcttcaatt
tggtcctcagggaagataatctgcactggagcaacaagtgaggaagaggcaaagttgggc
gctcggaggttagctcgctgtctgcagaaactgggctttaaggtgaggttttcggcgttc
agagttgtgaacgtgctcgctgtgtgctccatgccgtttgcagtgcatcttgtagacttc
acaaagaacaaccgacccattgccagttatgaacctgaactccatcctgctgctacttat
cgaatcaaaaatctgaaggctactgtccaagtgttttctactggcagcctcacagtgaca
ggaccaaatgtgcagagcgtggcctcagcagtggagtacatctacccactactgtatgag
tgtcagaaaccccgctgcaaataa
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