Xiphophorus hellerii (green swordtail): 116734410
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Entry
116734410 CDS
T07363
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116734410 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116734410 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116734410 (snw1)
Spliceosome [BR:
xhe03041
]
Complex B
Other components
Prp19-related factors
116734410 (snw1)
Complex C
116734410 (snw1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
116734410
NCBI-ProteinID:
XP_032441674
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Position
15:19581120..19588180
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AA seq
536 aa
AA seq
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MSLTSFLPAPTQLSQDQLEAEERLRAQKSLSTALVASRREPPPYGHRKGWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQSQGKEKVIFSKYTDLL
PKEVLKDDAQELQRPDEEAVRELTEKTRSALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDQRAGIKSHGDKGGEDNEARERDMIRHD
RRKDRQHDRNISRAAPDKRSKLQRDQDRDVSELIALGKPNPRTTSEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRSGRDMASNIYRPTKNVDKEAYADDFDSLMQNNRFAPDKEF
SGSDHGQRRDGPVQFEEDPFGLDKFLEQAKQHGGSKRPSTSNRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttactagctttttaccagccccgactcagctgtcgcaggaccagctggaggca
gaggagaggctccgggcccaaaagtccctctccaccgcactggtggcatcccgcagagag
ccgcctccttacggacacagaaaaggctgggtgccccgctcgcttgaggattttggagat
ggaggcgctttcccagaaatccacgtggcccagtttccgctggagatgggcaggaagaag
aaaacgtccaatgccctggcagtacaagtggacgcagaaggaaaaatcaaatatgacgcc
atcgcgaggcaaagccaggggaaggagaaggtgatcttcagcaaatacacggacctgctc
ccgaaggaagttcttaaagatgatgctcaggagctccagagacctgatgaggaggctgtg
agagagctgacagagaaaacccgatccgccctggagaagcaggtttctcaaaagattgct
gccgccatgcctgtaagagctgcggacaagcaggcccctgcacaatacatcagatatacg
ccgtcccagcagggagtggcttttaattctggagccaaacagagagtgatccgtatggtg
gagatgcagaaagaccccatggagcctcctcgctttaaaatcaacaagaagattcccaga
ggacctccgtcaccgccggcccccgtcatgcattctcccagcagaaaaatgacggtcaaa
gagcagcaggagtggaagattcctccgtgcatctccaactggaagaacgcaaagggctac
accatcccactagacaaacggctggctgctgatggaaggggtctgcaaacagttcacatt
aacgagaactttgccaagctggccgaggctctctatattgcagacagaaaggccagagaa
gcggtggagatgcgagcgcaggtggagaagaagatggctcaaaaggagaaggagaagaag
gaggagaagctgagggagctggctcagatggcccgagaccagagggccgggatcaagagc
cacggcgacaaaggcggtgaggacaacgaggccagggagcgtgacatgatccgccacgac
aggaggaaagaccgacagcacgacaggaacatttccagggcggctcctgataagagatcg
aagctccagagagatcaggacagagacgtcagcgagctcatcgctctgggcaagcccaac
cctcgtaccaccagcgaagctcagtacgaccagcgactcttcaaccagagcaagggtatg
gacagcggttttgctggcggcgaagatgagacctacaacgtgtacgaccagccgttccgc
agcggcagagacatggcctccaacatctacagacccaccaagaacgtcgacaaagaagcc
tacgcggatgacttcgactctctcatgcagaacaacagattcgctccagacaaagagttc
tccggctcagaccacgggcagaggcgtgacgggcctgtgcagtttgaagaggatcccttc
ggtctggataagtttctggagcaggccaaacagcacggcggctccaagaggccgtccacc
agcaaccgctccaaggacgactaccacgacaagaaacgcaggaaggaatga
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