Xiphophorus hellerii (green swordtail): 116734478
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Entry
116734478 CDS
T07363
Symbol
gtf2h5
Name
(RefSeq) general transcription factor IIH subunit 5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03022
Basal transcription factors
xhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116734478 (gtf2h5)
09124 Replication and repair
03420 Nucleotide excision repair
116734478 (gtf2h5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116734478 (gtf2h5)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116734478 (gtf2h5)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116734478 (gtf2h5)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116734478 (gtf2h5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
116734478
NCBI-ProteinID:
XP_032441800
LinkDB
All DBs
Position
15:6518164..6519891
Genome browser
AA seq
71 aa
AA seq
DB search
MVNVHKGVLVECDPAMKQFLLYLDETMALGKKFILKDLDDTHVFILAEVVQILQERVGEL
MDQNSFPITQK
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtccacaaaggagtccttgttgaatgtgatcctgccatgaagcagttcctc
ctctacctcgacgaaacgatggctttgggaaagaagttcatcttaaaagatctggatgac
acacatgttttcatcctggcagaggtggttcaaatcctgcaggaaagagtcggcgagtta
atggaccaaaattcattccccatcacacaaaaataa
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