Xiphophorus hellerii (green swordtail): 116734490
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Entry
116734490 CDS
T07363
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03410
Base excision repair
xhe04210
Apoptosis
xhe04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116734490 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116734490 (parp1)
04217 Necroptosis
116734490 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116734490 (parp1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116734490 (parp1)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116734490 (parp1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
116734490 (parp1)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116734490 (parp1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116734490 (parp1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116734490 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
116734490
NCBI-ProteinID:
XP_032441813
LinkDB
All DBs
Position
15:complement(12735079..12750617)
Genome browser
AA seq
1015 aa
AA seq
DB search
MADNQEEKLYKAEYAKSGRASCKKCKDSIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADIAGFSDLRWEDQEKVKKAIESGGAVGIGKGSQKSAAKGEKTLNDFAVEYAK
SNRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFRPECNAA
QLKGFNALRAEDQEELKKRLPAVKSEGKRKADEVDGASKKQKKEEDEEKKKLEEQLKNQS
QLIWGIKDKLKKHCSVNDMKELLIANGQDVPSGESNVLDSLADGMAFGALESCKECKGQL
VFKGDLYYCSGDISAWTKCVFKTKTPPRKNFIVPKEFHEVPFLKKFKFKGQDRVYPKEAP
AQTLKPAKAETLASASSAPSERLLEAAPSDKPLTGMKLLAVGKLSKNKDDLKAAVEELGG
KITGTANKASLCLSSKKEVEKMGKKMEEVRDAGVRVVSENFLTDIKSSGKALQELVSLHA
ISPWGAEIKAEPQAPAATSKSGALSAKSTGRVKEEEGGSKTKKMKLTVKGGAAVDPDSGL
ENNAHVLEQNGKMYSATLGLVDIVRGTNSYYKLQLLEEDVQKRYWVFRSWGRVGTTIGGN
KLDKFHDKNSALDNFLGVYKEKTGNDWGTSNFTKYPNKFYPLEIDYGQDEEAVRRLTASA
GTKSKLDKPVQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQA
VSDSVPEAQILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVEMLDNLLDIEVAYSLLR
GGAQDNEHDPIDINYEKLKTKIEVVDKTTQEAEIIMQYVKNTHAATHNTYTLEVQDIFKV
AREGEHQRYRPFEELHNRQLLWHGSRATNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFAD
MVSKSANYCHTSQSDPVGLILLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPN
ASTTLNGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQINLKYLLKIRFNYQTSLW
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaccaggaggagaagctgtacaaggcggagtacgctaaaagcggccgcgcc
tcttgcaagaaatgcaaagatagcatcgctaaagactcgctgaggatggccatcatggtt
cagtcgcccatgtttgacgggaaggtcccccactggcaccacttctcctgcttctggctg
cgagcggcggctcagtccacggccgacatcgccggattttccgatctgcgctgggaggac
caggagaaggtgaaaaaggccatcgagagcggcggagctgtcggaataggaaaaggtagc
cagaagagtgcagctaaaggagaaaagactctgaatgattttgcggtggaatatgccaag
tcgaaccgcagcacatgcaaaggctgcgagcagaaaatagaaaaggaccagattcgtgtg
tccaagaagacggtggacccggagaagcctcagctgggcctgatcgaccgctggtaccac
acggcgtgcttcgtgtcccgcagggaggagctggtgtttaggcccgaatgcaacgccgcc
cagctgaagggattcaacgcgctgcgtgcagaagaccaggaggagctgaagaagaggctg
cctgctgttaaatctgaagggaagcgtaaagcggatgaggtggatggagcatcaaagaag
cagaagaaagaggaagatgaggagaagaagaagcttgaagagcaattgaagaatcaaagc
cagctgatttggggtattaaagacaagctgaagaaacattgctcagtcaacgacatgaag
gagctgctgattgcaaacggccaggatgttccctccggagagtccaacgtgctggacagc
ctggctgatggcatggccttcggtgctctggaatcctgtaaggagtgcaagggccagctg
gtgtttaaaggagatttgtattactgttctggcgacatttcagcctggacaaagtgtgtg
ttcaaaaccaaaactcctccacgcaaaaactttatcgtccctaaggaattccacgaagtt
ccttttctaaagaaatttaaattcaaggggcaggacagggtttaccccaaagaggctccc
gctcaaactctgaaaccagcgaaagccgaaaccctggcgagcgcttccagtgctcccagt
gagcgactgctggaagcagcaccttcagacaaacctctaactggcatgaagctgctggct
gtcggcaagttatctaaaaacaaagatgatctgaaggcagctgtggaggaacttggtggg
aaaattaccggcactgccaataaggcctctctctgtctcagctctaagaaggaggtggag
aagatgggtaagaagatggaggaagtgagagacgcaggcgtgcgagtcgtctcagagaat
ttcctcacagacatcaagtcatcgggtaaagctcttcaggagctggtgtctcttcacgcc
atctctccctggggtgcagaaattaaggctgaacctcaggctccagctgcaacctccaaa
tctggagctctgtctgctaagagcaccggcagggtaaaggaggaagaaggtggtagtaag
accaagaagatgaagctgacggtcaaaggcggagctgctgtggatccagactcgggtctt
gaaaacaatgcccatgtcctggaacagaatgggaagatgtacagtgctactttgggtctt
gtggacatcgtcagaggaacaaactcttattataagctgcagctgctggaggaagatgta
caaaaaagatactgggttttcaggtcttggggcagagtgggcaccaccatcggaggcaac
aagttggacaaattccacgacaagaactctgcgctggataatttccttggggtttataag
gaaaagactggaaatgattggggtacctccaacttcactaaatatccaaacaagttctac
cctctggagattgactatggacaggatgaggaagctgtgagacggctgacggcctctgct
ggcactaagtctaagctggacaaaccagttcaggatctgatcaagatgatttttgatgta
gagagcatgaagaaggccatggttgagtttgagattgatctgcagaagatgccacttggc
aagctgagtaagagacaaatccagagtgcctacgctcttctgactgaagtacagcaggct
gtgtcagacagcgtacctgaggcacagatactggatctctccaatcgcttctacaccctc
attcctcatgacttcggcatgaagaaacctcctctcctcaacaacctggattacattcag
gccaaagttgagatgttggacaacctgctggacatcgaggtcgcctacagcttgctgaga
ggaggagctcaggacaatgagcacgatccaattgacatcaactatgagaaactcaaaact
aagatcgaggttgttgacaagaccacgcaggaggctgagatcataatgcaatacgttaag
aacacccacgcggctacacacaacacctacaccctggaagtgcaagacatcttcaaagtt
gcacgagaaggagagcaccaacgctaccgtccattcgaggagctacacaatcgacagcta
ctgtggcacggctctcgcgccacaaactatgctggtattatgtctcagggtcttcgcatt
gcacctccagaggccccagttactggttacatgttcggcaaaggtgtgtactttgctgac
atggtgtccaagagtgcaaactactgtcacacctctcagtcagaccctgtgggactcatt
ctgctggcagaggtcgctctaggcaacatgcatgaactgaagaaagcctctcacattaca
aaattaccaaagggaaagcacagtgttaaaggtttgggtagaaccgctcctgatccaaat
gcttctaccactttgaacggggtgcaagtgcctctgggaaaaggagtcaatactaacatt
gatgacacaagtctactgtacaacgagtacattgtatatgatgtggctcagataaacttg
aagtatctcctgaagatcaggtttaactaccagacatctctgtggtga
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