Xiphophorus hellerii (green swordtail): 116734493
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Entry
116734493 CDS
T07363
Symbol
psmc1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116734493 (psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xhe03051
]
116734493 (psmc1)
Proteasome [BR:
xhe03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116734493 (psmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_3
AAA_25
AAA_14
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
NB-ARC
AAA_33
AAA_7
AAA_24
Parvo_NS1
ABC_tran
PhoH
NACHT
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
116734493
NCBI-ProteinID:
XP_032441816
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All DBs
Position
15:20543120..20550554
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagccagagtggaggtcacggtccgggaggaggcaagaaggatgacaaggat
aaaaagaagaagtatgaacctccaattccaaccagagtggggaagaagaagaagaagaca
aagggtcccgatgccgctagcaaacttccactagtcacacctcacactcagtgccgcttg
aagctgctgaagcaggaacggatcaaagactacctgctgatggaggaggagttcatcagg
aaccaggagcagatgaagcctctagaagagaaacaggaggaggaaaggtcaaaggtggac
gacctgcgaggaacccccatgtcggtaggcaccctggaagaaatcatagacgacaaccac
gccatcgtttccacgtcggtgggatcggagcactacgtcagcatcctgtccttcgtggat
aaggatctgctggagccaggctgctccgttctgctcaaccacaaggttcatgctgtgatc
ggggtgctaatggacgacaccgaccccttggtgacggtgatgaaagtggaaaaagctccc
caagaaacctacgctgatataggaggactggacaatcagatccaggagattaaggagtct
gtggagctgccgctcacacaccctgaatactacgaggagatgggcatcaagcctcccaaa
ggtgtcatcctgtacggacctcccggcacaggtaagacgctcctcgccaaggccgtggcc
aaccagacgtcggccaccttcctgcgtgtggtcggctcggagctgatccagaagtacctc
ggagacggacccaagctcgtgcgggagctgttccgggtggcggaggagcacgcgccgtcc
atcgtcttcatcgacgagatcgacgccatcggcactaagaggtacgactccaactcgggt
ggcgaaagggagatccagaggaccatgctggagctgctcaaccagctggacggcttcgac
tcgcggggcgacgtgaaagtgatcatggccaccaaccggatagaaacgctggacccggcc
ctcatcagacccgggcgaatcgacagaaagatcgagtttcctctgccggatgagaagacc
aaaaggagaatcttccagatccacaccagcagaatgacggtggcagacgacgtcaccctg
gacgacctcattttggccaaagacgacctatcaggagcagacattaaggccatctgcaca
gaggcaggcctcatggcgctgcgagagcgccgcatgaaagtcaccaacgaagacttcaaa
aagtccaaggagaacgtcctgtacaagaagcaggagggcacaccggagggcctttacctt
taa
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integrated database retrieval system
