Xiphophorus hellerii (green swordtail): 116734605
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Entry
116734605 CDS
T07363
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116734605 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
Patched domain-containing proteins
116734605 (ptchd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ORF45
Motif
Other DBs
NCBI-GeneID:
116734605
NCBI-ProteinID:
XP_032441984
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Position
15:complement(23053083..23091604)
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AA seq
921 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLRASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFSIDQSKHKLYSDLHTPGRYGRLILLARS
GGNILELADQVLQVHRQVLELRVAYKGFNYTFAHLCVLSHGDRRCLLDDIVTVFQDIQQA
VLSNNSFHKVPLSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRSI
GPVVQDVIAERWENEFCALVTRLSTAEAPHPTDQLHIQSLTSFSLWRDFHQTGMLSKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYAVTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNISASTKSDFINILKGSFLRSPEYQHFTEDIIFSKN
RNTDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREEIECIEVRENPDHVTNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattctgtggaggatgctgcgg
caagtgatacacagagggctcagggcttccttctactggctcggcttgttcgtcagcagg
caccccgtcttcttcctcaccgtccccgcggtgctcaccatcatcttcggctccaccgtg
ctcagccgcttcaagcccgagcgggacctggaggtgctggtcgccccgactcacagcctg
gccaagatcgagcgcagcctcgccaacagcctgttctccatcgaccagtccaagcacaag
ctgtactcggatctgcacacgcccggcagatacggccggctcatcctgctggccaggtcc
ggcggcaacatcctggagctggccgaccaggtcctgcaggtccaccggcaggtgctggag
ctgcgcgtcgcctacaagggcttcaactacacgttcgcgcacctgtgcgtgctgagccac
ggggaccggcgctgcctcctggatgacatcgtcaccgtgttccaggacatccagcaggct
gtgctgtccaacaacagcttccacaaggtgccgctcagctaccccaacaccactctaaag
gatggacgtgtgtccttcatcggccaccagcttggaggggtatccttctcacccaacagt
cgggaccagcaggtcaagtttgcccgggccgtccagatcacatactacctccgtagcatc
ggccctgtggtgcaggacgtcatcgcagagcgctgggagaatgagttctgcgctctggtc
accagactgtccacggcagaggcgccgcacccgaccgaccagctccacatccagtcgctc
acttccttcagcctttggcgggacttccaccagaccggcatgctgtccaaaggggaggtg
ctggtcagtctggttctggtgctcctggctgccaccatctccagctccatgcgggactgc
ctgagggggaagcctttcctcggcctcctgggcgtgctgaccatttgcatcgccaacgtg
acagctgcagggatcttcttcatatcggatgggaagttcaactccacactgctgggaatc
ccgttttttgccatgggtcacggtaccaaaggggtctttgaacttctggcaggctggagg
agaacaagggaaaaccttcccttcaaggagcgcgtggccgacgccttcgctgacgtgatg
gtgtgctacaccatgaccagctcgctctatatcatcaccttcggcatgggagccagccct
ttcaccaacatcgagtcggtgaaaatcttctgtcagagcatgtgcgtggccatcctggtc
aactacttctacgttttctctttttacggctcctgcctggtgttcgccggacagctcgaa
cagaaccgctaccacagcgttttctgttgcaagatcccctcagtggaatacttggaccgt
cagccgacatggtttaaaaccatgatgagcgacggccacgacctgtccacccatcacgac
agcgtgccgtaccaaaatcacttcatccagcacttcctgcgtgagcattacactgagtgg
attactaacacctatgtcaagcctttcgtggtcatcctttatcttatctatgcttctttt
tcattcatgggatgtttacaaattagcgatggatcgaacatagtgaacctgctggccagt
aactcgccaagcgtttcgtacgccgtgacccagcagaagtacttcagtaactacagtcct
gtgattgggttttacatctacgagcccatcgagtactggaactccactgtgcaggagcac
ctgaagactctcagtcatggcttcaacaagatctcttggatggacaactttttccactac
ctccgggtggtgaacatcagcgcgtcgaccaagagtgacttcatcaatattctgaagggt
tctttcctgcgcagcccggagtaccagcactttacagaggacatcatcttctcgaaaaac
cgcaacacagacgagtacgacattatcgcctcgcgcatgtacttggtagcgcgaaccacg
gagaagaagagagaggaggtggtggagctcttggagaagcttcgccccttgatgctgatc
aacagcatcaagttcattgccttcaatcccacgtttgttttcatggaccgctacagttcc
tccgtcatctcgcccatcctgacctcaggcttcagcgtgctcaccatcctcatcctcacg
ttcttcctggttatcaacccgttgggaaacttctggctcattctcacggttacatccgtg
gagctgggcgtcttgggtttgatgaccctctggaacgtcggcatggacagcatttcaatc
ctgtgccttatttatactctaaacttcgctatggatcactgtgcaccacacctgtacact
tttgtgttggccactgagcacacgaggacgcagtgcatcaagttagcactggaggagcat
ggggcggccatcctgcagaacacgtcctgcttcgtgatcgggatcatgcctctagtgttt
gtgccttccaatttgacctacacgctgttcaagtgctccctgctcacggcgggctgcacc
ttgttgcactgttttgtcatcctgcccgtcttcctgactttctttccgccgtccaaaaag
aggcacaagaagaaaaagcgggcaaagcggaaagagcgggagagggaacgcgagcgggag
agggaacgggaggagatagagtgcatcgaagtcagggaaaatcctgatcacgtgacaaac
gtttga
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