Xiphophorus hellerii (green swordtail): 116734690
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Entry
116734690 CDS
T07363
Name
(RefSeq) syndecan-2-like
KO
K16338
syndecan 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04512
ECM-receptor interaction
xhe04514
Cell adhesion molecules
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116734690
04514 Cell adhesion molecules
116734690
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116734690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116734690
Proteoglycans [BR:
xhe00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116734690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
CclA_1
LapA_dom
DUF1757
Motif
Other DBs
NCBI-GeneID:
116734690
NCBI-ProteinID:
XP_032442110
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Position
15:complement(7975078..7978183)
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AA seq
162 aa
AA seq
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MRLSLTVSVVLALGLILPERASLYGPPEDWEGSGYDLDGSGSGNDSEQEGTNNNPDPDIV
PNPVNGNTNSAKSSSVLNVGISHRHDVDAATELIVISNSNSLLENKEIVAAAIAGGLAGA
TIGVLLSVILIYKWRKKHKEEHIQNKASNEEYHKPTREVAFI
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcggttatccctgacggtgtccgtggttttagcactgggattaatccttcctgaacgg
gcgtcgctttatggacctccagaggactgggagggatctggatatgacctggatggttct
ggttctggaaatgattcagaacaagaggggaccaacaacaatcctgacccagatattgta
ccaaaccctgtaaatggaaacacaaattctgccaaaagctcttcagtgctgaatgtgggg
atatcacacaggcatgacgtagatgctgcaacagaattgattgttatctcaaacagcaac
agcttactggaaaacaaagagatcgttgcagctgccattgcagggggactagctggagca
acaataggagttctgctatcagtgatcctgatttacaaatggaggaagaaacacaaagaa
gaacatattcagaacaaggcttcaaatgaagaatatcacaaacccactcgggaagtagct
tttatttaa
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