Xiphophorus hellerii (green swordtail): 116734836
Help
Entry
116734836 CDS
T07363
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116734836 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116734836 (srebf1)
04131 Membrane trafficking [BR:
xhe04131
]
116734836 (srebf1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116734836 (srebf1)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116734836 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116734836 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
SHNi-TPR
ZapB
Motif
Other DBs
NCBI-GeneID:
116734836
NCBI-ProteinID:
XP_032442246
LinkDB
All DBs
Position
16:13965869..13980507
Genome browser
AA seq
1178 aa
AA seq
DB search
MNRLSFDDPSLDLDPTLSLNDPSEIDTVLLSDIDDMLQLINNQDMEFGGLFDPTPFSGSP
STQEMNALSQTITSASPPATTPTPSSTTTSSILSSNPHLDALLGPPISRSSSAPDKAFQP
ATFQQSPLAQVPSSAQRQQQPLSSQQAQSLRQPLVEQPQPSVSPPAAAQAAASPHGSPGP
NPAFSSTTQTLFTSPAPQTAPQPQAQPQAQSNFQSQSSFTAVGRSNVSSPATSLSSSPPS
VQPVTIQTQLQGLTTASPLLATSASPPAQTITTQVQQVPVLLQPQFIKAESVLLTTLKPD
PCMVTTMASPTSLVTTTSSVQSTSLQAFMGGGTILTTVPVMVDAEKLPINRIAIAGKPSG
QPHKGEKRTAHNAIEKRYRSSINDKILELKDIVAGTEAKLNKSAVLRKAIDYIRYLQQTN
QKLKQENMALKMAAQKNKSLKDLVAMEVDTQAEVKNELPTPPASDVGSPTSFSRCSSDSE
PDSPMGEDTKSNLGLLDQSAAGGVVGGMLDRSRMALCAFTFLFLSLNPLAALLCSSGSNS
AGNNADINPHHAGRSVLGVDIPDESWGWMDWMLPTILVWLLNGILVSGVLIRLLVYGEPV
TRPHSGSSVLFWRHRKQADLDLARGDFAQASHNLRTCLKALGRPLPISQLDLACAVLWSL
LRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSSRDAALVYHRLHQLHMTGKLNGSHLS
AVHMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASLPRILHFTSRVFLSSARQACLS
SSGCVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLE
KALYCVAQPHGEKSPNQADGEYADALEYLQLLISASDAAGATSQSFAIVSNMAIVTGCDP
HSKWWSSVAIVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRALLS
KPENCQLSLSHTDKASALLRDSLNLGPHCHSSSLDKVVELMVCDLLLVLRTNIWRLQQQG
TSPTGSGLAGSSGPASLHQASPPELQGFQQDLCSLRKLAHSFRPAMRRLFLHEATARLMA
GASPTRTHQLLDRSLRRRATPGAKTEECEARPGQREQAEAVMLACRYLPPSFLSAPGQRV
GMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcctgtcttttgacgatccttcgctggatctggatccaacactgtctcttaac
gacccaagtgaaattgacacggtcctcttaagcgacatcgatgacatgcttcagctcatc
aacaatcaggacatggagtttggaggactctttgatcccactcccttctcagggagccct
tccacccaagagatgaatgccttgtcccagaccatcacctctgcttcacctcctgccacc
actcccacaccttcatccaccaccacttcctccatcttgagcagcaacccccacttagac
gccctgttgggcccgcctatcagccgcagctcctcggccccagacaaggccttccagcct
gctaccttccagcagtctcccctggctcaggtacccagctccgcacagaggcagcagcaa
ccgttgtcgagccagcaggctcagagcctcagacagcccctggtggagcagccccagccg
agcgtcagcccgcctgccgccgcgcaggcagcagcgtcccctcacggctcgccaggtcca
aatccggcgttcagctccacgacacagacactcttcacatcccctgcgcctcagactgcg
cctcagccccaggcacaacctcaggcccagagcaactttcagagccaaagtagctttacg
gccgtcggccgcagcaacgtgagctctcctgccaccagcttatcgtcctcgcctccaagc
gtccagccagtgaccattcagacccagcttcaaggcctgaccaccgcctcccccctcctg
gccacctcagctagccctccagcacagactattacaacccaagtacaacaagtacctgtg
ctgctgcagccccagttcataaaggctgaatctgtgctgctcaccactttaaagcctgac
ccttgtatggtcacaaccatggcctcccctacgtctctagtgaccaccaccagctcggta
cagagcacatccctgcaggcttttatgggtgggggtaccatcctgaccaccgtgcctgtg
atggtggatgcggaaaagcttcccatcaaccgcatcgccatcgccggcaagccgtcaggc
cagccgcacaagggggagaagcgcactgctcacaacgccatcgagaaacgctatcgttcc
tccatcaacgataaaatattggagctgaaagatattgtcgctggcactgaagccaagctc
aacaagtcggctgtcctcaggaaagccatcgactacatccgctacctgcagcagacgaat
cagaagctcaaacaggagaacatggctctgaaaatggcagctcagaagaacaagtctctc
aaagacctggttgccatggaggtggacactcaggcagaagtgaagaacgagctgcccact
ccgccagcctccgacgtcggctcccctacctcgttctcgcgctgtagcagtgactcggag
cctgacagtcccatgggagaggacacaaagtcaaatttaggcttgctggaccaatctgca
gcaggtggcgtggtcggaggcatgctggaccgctcccgcatggcgttgtgcgcctttacc
ttcctcttcctctccctcaacccactggctgctttgctctgctcatccggcagcaactct
gcaggaaacaatgcagacattaacccccatcatgcaggaagaagcgtcttgggtgtagat
attccagatgagtcttggggctggatggattggatgctccctaccatattggtgtggctg
ctgaacggtattctggtgtcaggagttctgatccgattgttggtttacggcgagcccgtg
acccgtccacattcagggtcgtccgtgctgttctggagacaccgcaaacaggccgacctg
gacctggccagaggggattttgctcaggccagtcataacttacgaacctgtctgaaggcg
ctgggtcgccccctgcccatctcccagttggacctggcctgcgcggtgctctggtccctg
ctgaggttttgccttcagcgcctctgggtcggccgctggctcgccgcaagggctggaggt
ctgcgcagcgatcgccccctgcaggaggatgcgtgtaaaagcagtcgtgatgccgccttg
gtttatcaccgcctgcaccagcttcacatgacagggaagctgaacggcagccacctgtca
gcagtccacatggctttaagtgcggtgaacctggcagaatgtgctggctcatgcctgccg
gtagcaagtctggctgaggtctacgtctctgcagcgctacgagtcaaagccagcctgcca
aggatcctccattttacctctcgtgtgttcctgagcagcgcccgccaggcgtgcctgtcg
tccagcggctgcgtgcctccggccatgcagtggctctgtcaccctctcggccaccgcttc
ttcgtggacggggactgggccattcgcagcacgcctaaagaaagcatctacagccaggct
ggaaacactgtggaccctctggcccaggtgactcaggctttcagagaacacctcctcgaa
aaggctctttactgcgtcgcccagccgcacggagagaagagtcccaaccaggctgacggg
gagtacgccgatgccttggagtacctccagctgttgattagtgcgtctgatgccgccggt
gcaacatcccagtcctttgcaattgtctccaacatggctatagtgactggctgcgacccc
cactctaagtggtggtcctcggttgccatagtgatcatcaattggcttcaaggagatgat
gctgcagcagagaggctctatccaactgtggagcacctgccccgcagcctgcagaacgca
gagagtcttctgcccaaagcgtgcctcaacacattcagggcagtcagagctctgctgtcc
aagccagaaaactgccagctgagtctgagccacactgacaaggccagcgccctgctccga
gacagcctcaacctgggaccgcactgccacagctccagcttagacaaggtcgtcgagtta
atggtgtgcgacctcctgctggttttgaggaccaacatctggcgcttgcagcagcaagga
accagtcctacagggtctggcttggcgggctccagcggtcctgccagccttcatcaggcg
tcgccaccagaacttcagggcttccagcaagacctctgctccctgcgcaagctggcacac
agcttcagacctgcaatgcgaagattgttccttcatgaagccactgccaggctgatggcg
ggggccagtcccaccagaacccatcagctactggaccgctcactgcggcgccgagcaaca
cccggagccaagacagaggagtgcgaggcgcggcccggccagcgggagcaggccgaggct
gtgatgctggcctgccgctaccttcctccctccttcctgtcggccccgggccaaagggtg
ggcatgctggccgatgcggcccgcaccctggagaagctcggcgacaagaggacgctccac
gactgccagcagatgatcataaagctggggagcggcaccaccgtcaccagcagctag
DBGET
integrated database retrieval system
