Xiphophorus hellerii (green swordtail): 116734936
Help
Entry
116734936 CDS
T07363
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116734936
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
Others
116734936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
116734936
NCBI-ProteinID:
XP_032442402
LinkDB
All DBs
Position
1:24908986..24931539
Genome browser
AA seq
955 aa
AA seq
DB search
MKIRRLKVYVKAALNDRPRCRRRTGAVKEQPHRLLAKLCPLWFLSPSRHLFVSVGVKHRR
FPEGFTPKPQALETARRAGDSSDNLLRSTKEEGREKKEGGTEQSLEKLTLRCYVGYLLNK
LRVHTYTTRRPSWAASWKLGLLKHHEGVKVGAEMAELEIDQSNLPRVQEVCQNFAVLEDG
VLAHSLQEQEIEQYYTTNIQKNQLVQNDIRVARRLQQEEEQQRAQQSALLRQVSRQMEEQ
DFEYARVIQEEIQRRSEEVHRREQDDEEIAKQLQEEEEQQVRRRSQDQADFHEGSTSDPA
LPSSHHHTFSSPHRGQQQYSPVTSRWQHSTTHCGSVLTGPQTSSPRRAASQSSTTSWSNQ
GHVDTSRQRRPELREPVNEDSEDSDTVFTEQLSLWARRLYDRANTAPRQQQTSLRPPQER
NYRSLCTRSSFAKDLTGRKEESENFEEDYYENDNVQSRISRNVEYDSDEHEGRTQEADSR
PAEACERRCRRSESVSVHNRSRHRNRDLARTWSCKENPDKHVRFQDDPREPIRQQNDSLK
VWEMLGHILQERGVPVKVGGSGAPLQIRPQSRDSQVLYGSEVSYGDSQPHQRAFQRAAAT
RHSFHGDIRQRRRLSRGESFGRDHRADQDRRNYNREVCDRNSGEPHIFDRGTSWSEHKYV
NIENNRERKANHTRVKRVTSERRHWHKITEETLSSDEEQEAERRAERPRRRALHRSQSFS
SSRGSTRHRSRHIAAGASLQPEPSEAGLDLGDLNQVLQDEELARKLQEEEDKQLRRTSLR
NSYPEGDFRVAQVAQDEEIARFMQKQEIKAKRRSRELEGPGSWHEHRAMINHHDRRAARE
RQVYRERLDSEGLPSPTEDCSPENQPPSPVHAIPKAQQMRNIAEELDPTFQGRVHVPESF
QAGQSGQTSEALPTAQSGLQDLTLEEPTFIPPTKRQADKSGRSKPKEKREGCKQQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcggaggctgaaggtgtacgtgaaggcagcattgaatgaccgcccccgctgc
cgccgccgaacaggagcagtgaaggaacagccccacagactgctggctaaactttgtccc
ctctggtttctctcaccgagccgacacctctttgtttctgtcggggtcaagcaccgccgc
tttcccgaaggcttcacaccgaaaccacaggcgttagagacggccaggcgcgctggtgac
agctccgataatttgctgagatccacaaaagaggaagggagggagaagaaggaaggtggg
actgaacagagcttggagaagttgacacttcgttgttatgttgggtacttgttgaataag
ctgcgtgtacacacatatacgacacggcggccttcgtgggcagcgagctggaagctgggt
cttctaaaacaccatgaaggagtgaaagtgggggcagagatggcagagctggagatcgac
cagtccaaccttccacgtgtccaagaagtttgccagaactttgctgtgcttgaggatgga
gtgttggcacacagcctgcaagagcaggagattgagcaatactacaccaccaatatccag
aagaaccaactggtgcaaaatgacatccgggtagcccggaggctgcagcaagaggaggag
cagcagcgggctcagcagagcgccctgctcagacaggtttccagacaaatggaggagcag
gactttgaatacgcccgggtgattcaagaagagatccagcgacgctctgaggaggtacac
aggagggagcaggacgatgaggaaatagctaaacagctgcaggaagaggaggagcagcag
gtcaggaggaggagtcaagaccaggcggattttcatgaaggtagcaccagtgatcctgcg
ctgccgtcctctcaccaccacacattcagcagccctcaccgaggacagcagcagtactcg
cctgtcaccagcaggtggcagcattctaccactcattgtggttcagtgttaactgggcct
cagactagttctcccaggagagcagcatctcagagcagcacaacttcatggtcaaatcaa
gggcatgtagataccagcaggcaaagaaggcctgagctcagagagcctgtgaatgaggat
tcagaagactcggacactgtttttactgaacagctctctctttgggcccggcgactgtat
gacagagcaaatactgcacctcgtcaacaacagacttctttaagacccccgcaagagagg
aattacagaagtctgtgcactcgcagcagcttcgcaaaggacttaacaggcagaaaggag
gagagcgaaaactttgaggaagactattacgaaaatgataacgtgcaatccaggatatct
aggaatgtggaatatgacagcgatgaacatgaaggcaggactcaggaagcagatagtagg
ccagccgaggcctgcgaaaggcgatgtcgccgcagcgaatcggtgagcgtacacaaccga
agcagacacagaaacagagacctggcaagaacctggagctgcaaggagaaccccgataaa
cacgtccgctttcaggatgatccgagagaaccgattaggcagcagaatgacagcctgaag
gtgtgggagatgctcggccacattctgcaggagagaggtgtgcctgtgaaggttggtggc
agtggggcgccgctgcagataaggcctcaaagcagagacagccaggtgctttatgggagt
gaggtctcctatggtgactcccaaccacatcagagagccttccaacgagccgccgccact
aggcacagtttccatggagatatcaggcagaggaggagattgtcacgcggagaaagcttt
gggagagatcacagagcagaccaagacaggcgtaattataacagagaggtttgtgaccgc
aatagtggagagcctcatatctttgacagaggcacaagttggagcgaacacaaatacgta
aacattgagaataacagagagagaaaagcgaatcataccagagtaaagagggtgacgagc
gaacgcaggcattggcacaagatcacagaagaaacgttgagctcagatgaggagcaggag
gcggagagaagagcagagcgtccaaggcgacgagcgctacatcgtagccaaagcttcagc
agcagcaggggttcgaccagacacaggtcgaggcacatagcagcaggggcttctctgcaa
ccagagccaagcgaggcaggcctggatctgggagacttgaatcaggtcctacaagatgaa
gaactggcccgcaagcttcaggaggaagaagataagcagctaaggaggacatctttacgc
aattcctatccagagggggacttcagggtagctcaggttgcacaagatgaggaaattgca
cgttttatgcagaagcaggaaattaaggcaaagcgaagatctcgtgaactggaagggcca
ggatcttggcatgaacacagagcgatgatcaatcaccacgacaggcgagccgcaagagaa
agacaggtgtatcgagaaagactcgactcggagggtctcccctccccgactgaagactgc
tcaccagagaaccagccacccagccctgttcacgccataccaaaagcccagcagatgaga
aacatagcagaggagctggacccgaccttccaggggcgagtgcacgtcccagagagcttc
caagcagggcaaagtggtcaaaccagtgaggcgctccccacagcccaatccggcttacaa
gacctaaccctggaggagccgacgttcataccaccgacaaaacgacaggcggataaatct
ggacggagtaaacccaaagagaaaagggaaggatgcaagcaacaataa
DBGET
integrated database retrieval system