KEGG   Xiphophorus hellerii (green swordtail): 116735065
Entry
116735065         CDS       T07363                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116735065 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xhe03009]
    116735065 (tbl3)
Ribosome biogenesis [BR:xhe03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116735065 (tbl3)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Utp13 WDR55 WD40_Gbeta EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_RIG_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_pof12
Other DBs
NCBI-GeneID: 116735065
NCBI-ProteinID: XP_032442562
LinkDB
Position
16:13908997..13919282
AA seq 923 aa
MANTNLQFKTNYAVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFAVSCDDELLVTASRALLLKQWDWRQGTCTRSWKAIHTIPVASMTFDPSSTL
LATGGCDATIKVWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSVDCGIRLWDLR
SSQCVCVLDSHYSAVTSLSFSKDGDTMISSGRDKICTVWDLKSRQAKRTVPVYEAVEGVV
LLPEKTDLSQIGVKSKTLHFVTAGSKGVLRVWEASTARCVYTQSLPSTLTPSSEEDKEDD
DPRSLTYLFHLPASSRLATVTAEHNILFYQLPSLTTQQQFVGYNDEVLDVKFLGKDDTHI
VVATNSCQLKVFQLLTNSCQILYGHTDTVLTLDVFKKGSLFASCAKDRSVRVWQLDSDSG
QVRCVAQGSSHTNAVGSIGCSRMKASFVVTGSQDCTVKVWDLPAEFSGEEIHQLSPRSTE
KAHDKDVNSVSVSPNDKLLASGSQDRTAKLWSLSGDGNLGLLGVFRGHRRGIWSVCFSPV
DQILASSSADGTTKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTI
KTNECVKTLDAHQDKVWGLYGSRKDDKMVTGSADSNITVWLDVTKVELEEEQAKQEDQIL
KQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQVVDSSDLLETTLLRLRVDQKE
SLLRYCVVWNTNARNCLDAQAVLQVLLTHLPPEELLQFQGARTHLEGLLPYTERHMERIG
RLQQASMFLNYMWQKMRVAGASSGMEQDEDMDTTPLTQMQPLFFLDKEKARGGTDEREDQ
GDDGDREQEEESGFEVKDEEEAEEISASNKASANDAREKKGETNGRHKSESEASSEEEEE
DDHIMQVMRNLPISSAPRLQTLS
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggcgaacacaaacctgcagttcaagacgaattacgctgtttccagcaaaattgagccg
ttttacaaaggagggaaagtgcagatcagcaaagatgagaagtacattttctgcacatgt
ggatcccgtgtcaatgttttggagatcagcacgggcaagattgtccactgtgtggagcat
gatgatcaagaggatatcacatcatttgcagtcagctgtgatgatgagctgctggtgaca
gccagcagagctttgctcctgaagcagtgggactggaggcagggtacctgcactcgctcc
tggaaggctattcataccattcctgtggccagcatgacctttgaccccagctccacccta
cttgccacaggcggttgtgacgctaccataaaagtttgggatgtggttaagcagtactgc
actcacaacctcaaaggatcatccggtgtagtgcacttggtccagttccaccctgacatc
agccgactgcagctgttctcctcatctgtggactgcggcattcggctgtgggacctgcgc
tccagccagtgtgtgtgtgtcctggacagccactacagcgccgtcacctctctgagcttc
agcaaagacggtgacaccatgatcagttctgggagggataaaatctgtactgtttgggac
ctcaaatctcgccaggctaaaagaactgttcctgtttacgaggctgttgagggagttgtg
ctgctgcctgagaagacagacttatctcagatcggagtaaaaagcaaaaccttgcatttc
gtcactgctggaagcaaaggtgtgctgagagtgtgggaggcaagcactgctcgctgtgtt
tatacccagagccttccctcgaccctcactccttcctctgaggaagacaaagaggacgac
gaccctcgcagtttgacgtaccttttccacctgcctgcctcctccagactggccacggtc
actgcagagcacaacatactcttctaccagctgcccagtctcaccacacagcagcaattt
gtgggttacaacgacgaggtgctggacgtgaagttcctgggtaaagatgacactcacatt
gtggtggccactaacagctgtcagctgaaggtcttccagctgctcactaacagctgccag
attctctacggacacacagatactgtcctcactctggatgtgttcaaaaaaggctctttg
tttgcaagctgcgcaaaggaccggtcagtgcgtgtctggcagctggacagtgacagcggt
caggtccgatgtgtagctcagggatccagccacactaatgctgttggctccatcggctgc
tccaggatgaaagcgtccttcgttgtgaccggcagccaagactgcaccgtgaaggtgtgg
gatctgccagccgagttttctggagaagaaatccatcagctgagcccccgcagcacagag
aaagcacatgacaaggatgtaaacagtgtttcagtgtctcccaacgacaaactgctggcc
tctggctcgcaggaccgcacagccaaactctggtccctgtcgggggacggaaacctggga
ctcctgggtgtgtttcggggccaccggcggggcatttggagtgtgtgtttctctcccgtg
gaccagatcctggcttcctcctctgcagacggcaccaccaagctgtggggcctgcaggac
ttcagctgcctcaagacatttgagggccatgacgcatcggttctgaaagtgatctttgtg
agccgtggcacccagctgctgaccagcggttcagacggtttagtgaagctgtggaccata
aagaccaatgagtgtgtgaaaacattggacgcccaccaggacaaagtgtggggcctctac
ggcagccgtaaggacgacaagatggtcacaggctcagcagactcaaacatcacagtgtgg
ctggatgtgacgaaagtggagctggaagaggaacaagccaaacaagaggaccaaatactg
aagcagcaggagttgtccaacttgttgcacgagaagaaatacctgaaggccctgggtctc
gccatctcactggaccagcctcacacagtgctcactgtcatcaaagccattcgtcaggtg
gtggacagcagcgatctgttggaaacgacgttgctgcggctgcgagtagatcaaaaagag
tcgctcctgcgctactgtgtcgtgtggaacaccaatgccaggaactgtctggacgcccag
gcggtcctccaggtgctgctgacccacctgccacccgaagagctgctgcagttccagggg
gcccggacgcacctggagggtctcctcccgtacacagagagacacatggagaggatcggc
cgcctgcagcaggcgtccatgtttctcaactacatgtggcagaaaatgcgagtagctgga
gcctcatctggtatggagcaggatgaagacatggacaccactcctctcacgcagatgcag
cccttgtttttcctcgataaagaaaaagcaagaggcggcaccgatgagagggaagaccaa
ggcgatgacggggatagagagcaagaagaggagtctggttttgaggtgaaagatgaagag
gaggccgaagaaatcagtgcctcgaataaagcctctgctaacgacgcacgggagaaaaag
ggagaaaccaacgggcgccacaagtcagagagcgaggcgagctcagaggaggaagaggag
gacgatcatataatgcaagtgatgcgaaatctccctatttcatctgctccccgactccag
actttaagctaa

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