Xiphophorus hellerii (green swordtail): 116735065
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Entry
116735065 CDS
T07363
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116735065 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116735065 (tbl3)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116735065 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
116735065
NCBI-ProteinID:
XP_032442562
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All DBs
Position
16:13908997..13919282
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AA seq
923 aa
AA seq
DB search
MANTNLQFKTNYAVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFAVSCDDELLVTASRALLLKQWDWRQGTCTRSWKAIHTIPVASMTFDPSSTL
LATGGCDATIKVWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSVDCGIRLWDLR
SSQCVCVLDSHYSAVTSLSFSKDGDTMISSGRDKICTVWDLKSRQAKRTVPVYEAVEGVV
LLPEKTDLSQIGVKSKTLHFVTAGSKGVLRVWEASTARCVYTQSLPSTLTPSSEEDKEDD
DPRSLTYLFHLPASSRLATVTAEHNILFYQLPSLTTQQQFVGYNDEVLDVKFLGKDDTHI
VVATNSCQLKVFQLLTNSCQILYGHTDTVLTLDVFKKGSLFASCAKDRSVRVWQLDSDSG
QVRCVAQGSSHTNAVGSIGCSRMKASFVVTGSQDCTVKVWDLPAEFSGEEIHQLSPRSTE
KAHDKDVNSVSVSPNDKLLASGSQDRTAKLWSLSGDGNLGLLGVFRGHRRGIWSVCFSPV
DQILASSSADGTTKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTI
KTNECVKTLDAHQDKVWGLYGSRKDDKMVTGSADSNITVWLDVTKVELEEEQAKQEDQIL
KQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQVVDSSDLLETTLLRLRVDQKE
SLLRYCVVWNTNARNCLDAQAVLQVLLTHLPPEELLQFQGARTHLEGLLPYTERHMERIG
RLQQASMFLNYMWQKMRVAGASSGMEQDEDMDTTPLTQMQPLFFLDKEKARGGTDEREDQ
GDDGDREQEEESGFEVKDEEEAEEISASNKASANDAREKKGETNGRHKSESEASSEEEEE
DDHIMQVMRNLPISSAPRLQTLS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacaaacctgcagttcaagacgaattacgctgtttccagcaaaattgagccg
ttttacaaaggagggaaagtgcagatcagcaaagatgagaagtacattttctgcacatgt
ggatcccgtgtcaatgttttggagatcagcacgggcaagattgtccactgtgtggagcat
gatgatcaagaggatatcacatcatttgcagtcagctgtgatgatgagctgctggtgaca
gccagcagagctttgctcctgaagcagtgggactggaggcagggtacctgcactcgctcc
tggaaggctattcataccattcctgtggccagcatgacctttgaccccagctccacccta
cttgccacaggcggttgtgacgctaccataaaagtttgggatgtggttaagcagtactgc
actcacaacctcaaaggatcatccggtgtagtgcacttggtccagttccaccctgacatc
agccgactgcagctgttctcctcatctgtggactgcggcattcggctgtgggacctgcgc
tccagccagtgtgtgtgtgtcctggacagccactacagcgccgtcacctctctgagcttc
agcaaagacggtgacaccatgatcagttctgggagggataaaatctgtactgtttgggac
ctcaaatctcgccaggctaaaagaactgttcctgtttacgaggctgttgagggagttgtg
ctgctgcctgagaagacagacttatctcagatcggagtaaaaagcaaaaccttgcatttc
gtcactgctggaagcaaaggtgtgctgagagtgtgggaggcaagcactgctcgctgtgtt
tatacccagagccttccctcgaccctcactccttcctctgaggaagacaaagaggacgac
gaccctcgcagtttgacgtaccttttccacctgcctgcctcctccagactggccacggtc
actgcagagcacaacatactcttctaccagctgcccagtctcaccacacagcagcaattt
gtgggttacaacgacgaggtgctggacgtgaagttcctgggtaaagatgacactcacatt
gtggtggccactaacagctgtcagctgaaggtcttccagctgctcactaacagctgccag
attctctacggacacacagatactgtcctcactctggatgtgttcaaaaaaggctctttg
tttgcaagctgcgcaaaggaccggtcagtgcgtgtctggcagctggacagtgacagcggt
caggtccgatgtgtagctcagggatccagccacactaatgctgttggctccatcggctgc
tccaggatgaaagcgtccttcgttgtgaccggcagccaagactgcaccgtgaaggtgtgg
gatctgccagccgagttttctggagaagaaatccatcagctgagcccccgcagcacagag
aaagcacatgacaaggatgtaaacagtgtttcagtgtctcccaacgacaaactgctggcc
tctggctcgcaggaccgcacagccaaactctggtccctgtcgggggacggaaacctggga
ctcctgggtgtgtttcggggccaccggcggggcatttggagtgtgtgtttctctcccgtg
gaccagatcctggcttcctcctctgcagacggcaccaccaagctgtggggcctgcaggac
ttcagctgcctcaagacatttgagggccatgacgcatcggttctgaaagtgatctttgtg
agccgtggcacccagctgctgaccagcggttcagacggtttagtgaagctgtggaccata
aagaccaatgagtgtgtgaaaacattggacgcccaccaggacaaagtgtggggcctctac
ggcagccgtaaggacgacaagatggtcacaggctcagcagactcaaacatcacagtgtgg
ctggatgtgacgaaagtggagctggaagaggaacaagccaaacaagaggaccaaatactg
aagcagcaggagttgtccaacttgttgcacgagaagaaatacctgaaggccctgggtctc
gccatctcactggaccagcctcacacagtgctcactgtcatcaaagccattcgtcaggtg
gtggacagcagcgatctgttggaaacgacgttgctgcggctgcgagtagatcaaaaagag
tcgctcctgcgctactgtgtcgtgtggaacaccaatgccaggaactgtctggacgcccag
gcggtcctccaggtgctgctgacccacctgccacccgaagagctgctgcagttccagggg
gcccggacgcacctggagggtctcctcccgtacacagagagacacatggagaggatcggc
cgcctgcagcaggcgtccatgtttctcaactacatgtggcagaaaatgcgagtagctgga
gcctcatctggtatggagcaggatgaagacatggacaccactcctctcacgcagatgcag
cccttgtttttcctcgataaagaaaaagcaagaggcggcaccgatgagagggaagaccaa
ggcgatgacggggatagagagcaagaagaggagtctggttttgaggtgaaagatgaagag
gaggccgaagaaatcagtgcctcgaataaagcctctgctaacgacgcacgggagaaaaag
ggagaaaccaacgggcgccacaagtcagagagcgaggcgagctcagaggaggaagaggag
gacgatcatataatgcaagtgatgcgaaatctccctatttcatctgctccccgactccag
actttaagctaa
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