Xiphophorus hellerii (green swordtail): 116735103
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Entry
116735103 CDS
T07363
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116735103 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116735103 (hdac5)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116735103 (hdac5)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116735103 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
116735103
NCBI-ProteinID:
XP_032442609
LinkDB
All DBs
Position
16:complement(25811595..25878090)
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AA seq
1137 aa
AA seq
DB search
MLLHPTVSGLCTMLQTIYETESCFSSASTDSHHQPLELLSDSRGSGADMTAAVLEVKSSL
PSGMQSPVEATCEQRGGGGEGGGCIPGEGPGGGGGPVDLRTEPRLGSVSSGGAVDTALRE
QQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELE
HKRKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPGGL
NHSFSPKCWGSQHTSLEQSSPPQSNTPGTPPSYKLPPLLGNYEGKDDFPLRKTVSEPNLK
VRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEISVSSLCNSAPGSGPSSPNSSNTAI
ANGNTGSVPNIQTELRSLHQTLGADGTLSPLSLYTSPSLPNISLGLPANTHITPPQKLST
QQEAERQAIQSLRGGGALTGKFLSTSSLPAGAAHDVETPPPGSHSAHSSLLQHVLLLEQA
RQQTAMLVPMYNQSPLVTAERGVATGMRPVNKLPRHRPLARTQSAPLPQSPQALQQLVVQ
QQHQHFLEKHYKMLSKGGDLPRPPPTHPEETEEELTETNDMQEDEGAAPNSLQKEGSDDS
SHSSERLASHLKGEEESRVIQVKGESTESELDEDEEDDDVIQLRESEEEERGSYIQQSLQ
HLSVFSSSLPHRPLGRAKSSPATAVNPIKYLFTTGLVYDSLMLKHQCVCGNAHIHPEHAG
RVQSIWSRLQETGLLSRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLG
PISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRP
PGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPNVLY
ISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPIA
QQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAQCFGKLTQLLMGLAGGRIVMALEGGHDLT
AICDASEACVSALLGDLCDSGFQWPQEKPCPKACASLERVIDIQSKHWPCLQSASQTSGP
SLLAGSPVAPGQSERDEAETLSAMASLSVDVDQPGSVPENRESNRSTEEPMEEEPVL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacatcccactgtgtcaggattgtgcaccatgctgcagaccatctacgagact
gagtcgtgtttttcctctgccagcacagacagccaccaccagcctctggagctcctgagt
gacagcaggggctccggtgctgacatgaccgctgctgtcttggaggtgaagagcagcctc
ccatcaggcatgcagagtccagttgaagcaacatgtgagcagagaggaggtggtggtgaa
gggggtggctgtattcctggagaaggcccaggtggaggcggaggcccggtggacttgagg
acagagcccaggttgggctctgtgtctagtgggggagcagtggatacagccctgagagag
cagcagcttcagcaggaacttgtgcttctcaaacagcaacaggaactccagaagcagctg
ctatttgcagagtttcagaaaaaacatgaagtgttaacaaggcagcacgaagtccagctg
caagagcacttaaagcaacaacaggagctgctggcagcaaagcggcagcaggagttggag
cataagagaaaactggagcaacaaagacacgaagaacaggagaaacagagactggagcaa
caactgttgctgctgagaaacaaagagaaagggaaagagagtgccattgccagcacagag
gtgaagctgaagcttcaggagtttcttctcagtaagaaagaacctggtccaggaggactc
aaccattccttctccccaaagtgctggggaagccagcacacgtctctagagcaaagctcc
ccccctcagagtaacacccccggaacccctccctcctacaaactcccccctcttctcgga
aactacgagggcaaagacgacttcccacttcggaagacagtttcagagccgaacctgaag
gttcgatctagactcaagcagaaagtggcagagaggcgcagctctccattgttgcgcagg
aaggatggaactgtcatcagcaccttcaagaaaagggctgttgagatatcagtctcctcc
ctttgtaacagtgctccaggctcaggtcccagcagccccaacagttccaatactgccatc
gccaacggaaacacgggatcagtccccaacatacaaaccgagctgagatctctccatcag
acactgggggctgatgggacattgagtcctcttagcctctacacctcaccctccctgccc
aatatctccctaggcctccctgccaacacacacatcacaccaccccagaaactgtccacc
cagcaggaagcagagcgtcaggccatccagtccctacgagggggaggagctctaactggg
aagtttctctccacttcctccctaccagcaggtgcggcacatgatgtagagactccgccc
cccggctctcattcagcccattcctcgttgttgcaacacgtcctgttgcttgagcaggcc
cgacaacagaccgctatgttagtacccatgtacaatcagtcaccgctggttactgcagag
agaggtgtagccactggaatgcggcctgtcaacaagctgccccgccatcgaccgttggct
cgcacacagagcgcccctttaccccagtcgccccaggcgctgcagcagctggtggtccaa
cagcagcaccagcacttcctggagaaacactacaagatgctatcgaaggggggagacctc
cctagaccaccaccaactcaccctgaggagacagaggaggagctaacagagaccaatgac
atgcaggaggatgaaggcgcggctcctaacagcctgcagaaagaaggatcagacgacagc
agccactcatctgagcgactggccagccacttgaagggggaggaggaatccagggttatc
caggtcaaaggcgagagcacggagagtgagctagatgaagatgaagaggatgatgatgtc
attcagctaagggagagcgaggaagaggaaaggggcagctacatacagcagtccttgcag
catctgagcgtgttttcatcctcgctgccccacagacctctgggaagagccaagtcatcc
cctgcaactgctgtcaaccccatcaaatacctcttcaccaccgggttggtgtatgacagc
ctgatgctgaagcatcaatgtgtgtgtggcaatgctcacattcacccagagcatgctggg
agagtccaaagcatctggtccagactgcaggaaacaggcttactgagccgctgtgagagg
attcgtggaagaaaagcctctctagacgaaatccagtcggtccattcagagttccatacc
ctgctgtatggaaccagcccgctcaatcggcacaaactggaccacaagaagcttctgggt
cctatcagtcagaagatgtatgctgttctgccctgtggaggaataggggtggacagtgac
actgtgtggaacgaaatgcactcatcagcagcagttcgcatggcagtgggctcagttatt
gagctggcctttaaggtggctgcaggggagctgaagaacggctttgcagttgtgcgtcca
cctggtcaccatgcggaggaatccacagccatgggcttttgcttcttcaactcagtagcc
atcactgccaaactgctgcaacaaaagctaggagtagggaagatcctcattgtggactgg
gacattcaccatggcaacggcacccagcaggccttctacaacgatcccaatgtgctctac
atatctctgcatcggtacgatgatggaaacttctttcctggcagtggagcaccagaggag
gtgggctcaggtgcaggagttggctttaatgtaaatatagcatggactggaggagtagag
cctcctatgggtgatgtggaatacctcactgctttcaggagtgtggtaatgcccattgcc
cagcagttcagtccagatgtggtcctggtgtctgcaggctttgatgcagtggaaggtcat
cagtctcctctgggtggctacaatgtttctgcacaatgttttggtaagctaacacagctg
ctgatgggactggcaggtgggcggattgtaatggcgctagagggtggccatgacctaact
gccatctgtgacgcatcagaggcctgcgtctctgccctcctgggagatctgtgtgactct
gggtttcagtggcctcaggagaagccatgtccaaaagcctgcgcctccctggagagagtc
atagacatccagagtaagcactggccttgtctccagagtgcgtctcaaaccagtggcccc
tcgctcctggcagggtcccctgtggccccaggccagtctgagagggacgaggctgaaaca
ctcagtgccatggcctccctaagtgttgatgtggaccagccaggctctgttcctgaaaac
agagaatctaacaggtctacagaggagccaatggaggaagagcctgtgttataa
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integrated database retrieval system
