Xiphophorus hellerii (green swordtail): 116735154
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Entry
116735154 CDS
T07363
Name
(RefSeq) coronin-1A-like
KO
K13882
coronin-1A
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116735154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116735154
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116735154
04147 Exosome [BR:
xhe04147
]
116735154
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Phagocytosis
Coronins
116735154
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116735154
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116735154
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
WDCP
Beta-prop_WDR75_1st
Trimer_CC
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
DUF7310
CC4_CEP85
DUF6779
DivIC
Motif
Other DBs
NCBI-GeneID:
116735154
NCBI-ProteinID:
XP_032442702
LinkDB
All DBs
Position
16:complement(4278309..4287201)
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AA seq
456 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQAVKADQCYDDIRISTMTWDSNFCSVNPKFVSMIVDASGGGAFM
VLPLSKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGLTSPL
TEPVVKLEGHCKRVGILSWHPTAHNVLLSAGSDNVIILWNVARGEEVVRIDSVHPDLIYS
ACWNRDGSRILTSCKDKKLRVLDPRKGTVLFEKDKPHEGSRPVRGVFVSDGKILSTGFSR
MSERQVALWDPNNFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMFSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTVGPDPSVEADEWFDGKEAPPVLISLKDGFVATTKAKEFKVHKSLLKTTTASAGS
QPEGSGEVQSLRKEVKDLKAALEELTKRVKELETKN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggttgtgagaaccagcaagttccgtcacgtctttggccaggccgtgaag
gccgaccagtgttacgatgacatccgcatctccaccatgacatgggacagcaacttctgc
tccgtcaaccccaagtttgtgtccatgatagtggacgccagcggcggcggggccttcatg
gtgctgcccctcagcaagaccggacgtatcgacatgtcctaccccaccgtctgtggccac
acaggtccggttctggacatcgagttctgccctcacaatgacaacatcattgccagcgga
tctgaggactgcagcgtcatgatttgggagatcccagacggcgggctcacctcaccgctc
acagagccggttgtgaagctggaaggtcactgtaagcgtgtcggcatcctgagctggcac
cccaccgcccacaatgtgctgctgagcgcaggctctgataatgtgatcatcctgtggaac
gtggctcggggggaggaggtggtgaggatcgacagcgttcatcccgacctcatctacagc
gcctgctggaacagggacggctccaggatcctcacctcctgcaaagacaagaagctgaga
gtgctggacccccgcaaaggcaccgtgctctttgagaaggataaacctcacgaaggctcc
aggcccgtgagaggcgtgttcgtgtctgatgggaagatcctgagcaccggcttcagtcgc
atgagtgaacggcaggtggcgctgtgggatccgaacaactttggagagccgctgaccctg
caggagctggacacgagcagcggcgtcctcctgccgttcttcgacccagacacgggaatc
gtctacctctgtggcaagggagacagcagcatccgttacttcgaagtgacggacgaggct
ccttacgtccactacctgtccatgttcagcagcaaggagagccagaaggggatgggatac
atgcccaagagaggcctggaggtcaacaagtgtgaaatcgcaaggttctacaaactgcat
gagaggaaatgtgaacccatagtcatgacggtacctcgtaagtcggatctattccaggag
gatctgtacccagacaccgtcggacctgatccgtcggttgaagccgatgagtggtttgat
gggaaagaagctccgcctgttctgatttccctaaaggacgggtttgtagccaccaccaag
gccaaggaattcaaagtccataagagtctcctgaagactacgactgcttctgcggggagc
caaccagaaggcagtggggaggtgcagtctctaaggaaggaggtgaaggacctgaaagca
gctttagaggagctgaccaagcgcgtgaaagaactggagaccaaaaactaa
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