Xiphophorus hellerii (green swordtail): 116735200
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Entry
116735200 CDS
T07363
Symbol
rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A
KO
K10839
UV excision repair protein RAD23
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03420
Nucleotide excision repair
xhe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116735200 (rad23a)
09124 Replication and repair
03420 Nucleotide excision repair
116735200 (rad23a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xhe03051
]
116735200 (rad23a)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116735200 (rad23a)
Proteasome [BR:
xhe03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116735200 (rad23a)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116735200 (rad23a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116735200
NCBI-ProteinID:
XP_032442797
LinkDB
All DBs
Position
16:complement(22571434..22581943)
Genome browser
AA seq
369 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKTKPAAPASPPVSEAPKPPVQDSGSTSTPAPATNPAPAPAPAPAP
TPAAVPISSEEAKPEPNTAATEPQQPASSSGVSQGLDASSTLVTGAEYEAMLTEIMSMGY
ERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPTSGPTEPPSLAEGENPLA
FLRTQPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGD
APEVGEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANF
LLNQGLEDD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaacactgcagcagcagactattcagattgagatagaccccgaa
caaacggtgaaggccttgaaggagaagatcgaggctgaacggggaaaggacaacttcccc
gtttctgggcagaagctgatttatgccgggaaaatcttgcaagatgacacgcctattaaa
gactacaagatcgacgagaagaattttgtcgtagtgatggtgtccaagactaaacctgcg
gctccagcctcaccgccagtctcagaagcccccaagccgcctgtacaagactctggctcc
acctccacccccgccccggctacaaaccccgctccggcccccgccccggctccggccccg
acccccgcagctgtccccatttcttcagaggaggccaaaccggagcccaacacggcagcc
acagaaccccagcagcctgccagctccagtggtgtcagtcagggcctggacgcctcctca
acgctcgtgactggagccgagtacgaggccatgctgacagagatcatgtctatgggctac
gagagggagcgagtggtagctgcactacgggccagcttcaacaaccctcacagagcggtg
gagtacctcctcactggtatccccagcagcccagttcaggagagcaacccaccggcccag
gcccccacatctggccccacggagcctccgtctctagcagaaggtgagaacccactagca
ttcctgagaacccagccgcagttcctgcacatgaggcaggccatccagcagaacccggct
ctgctcccagcactcctgcagcaactgggccgagagaacccacagcttctacagcaaatc
agccaacaccaggagctgttcatccagatgctgaacgagccggtgggagaaggaggcgac
gccccggaggtcggcgagatgggggcggcgggcgaagagggcgcgcccgtcaactacatc
caggtcacaccgcaggagaaggaagccatcgaaaggttaaaagctctgggtttccccgag
gcgctggtcatccaggcctacttcgcctgcgagaagaacgagaacctggcggccaacttt
ctcctcaaccagggactggaagacgactga
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