Xiphophorus hellerii (green swordtail): 116735233
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Entry
116735233 CDS
T07363
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116735233 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116735233 (dhx58)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116735233 (dhx58)
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116735233 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
BTRD1
Feld-I_B
AAA_22
Motif
Other DBs
NCBI-GeneID:
116735233
NCBI-ProteinID:
XP_032442865
LinkDB
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Position
16:complement(6943591..6947811)
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AA seq
681 aa
AA seq
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MAEFELRSYQKEVVERALKGENVIIWLPTGGGKTRAAVYVARRHLETTANAKVMVLVNKV
HLVDQHYTKEFKPYLGNGYRLMKVSGDSQEKDFFGIVVQDNDVIICTAQILYNALINKEE
AKHVELSDITLLIIDECHHTHKESVYNKIMRCYVEKKLKGQRQIPQILGLTASPGTGGAR
DLEDAVNHVLEICANLDSVIVSTKNYTPELEEKVPRPQKTFDIVEKRAADPFGDHIKWMM
QQIHGFMNLPSDVRLRECGTQEYEADVVILEQRGVREDNRLLAQCALHLRQYNDALLIND
TLRMMDAYRSLEEFYNTKVTTAIDGTDYFLVGLFQENQVELKNFATDSRFENPKMAKLES
TLLGQFGPDVQSRGILFSRTRRSTHCLLDWVQKKRTLQKAGIKAAILTGAGNGITYMTQN
EQADTIRNFRNGTLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARDSQ
YSVVAQEGGREIRRERINEYLEELTGKAIARVQSMSEHEFRRKTNEIQTQTIIMNKVLQD
RKTEKKNRHAASSIRILCRNCFAQVASGSDFKLLENAHYVNVNPDFKNHYKLGGKVVLEK
RFEDWEPGCTVSCNNGNCNKDWGFEMKYKKVAILPNLAIKNFALETPEGRVTVKKWKDVP
FMVEEFTFEQYCNDHFPDLFG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtttgaactacgttcctaccagaaggaagtggttgaaagggcactgaaggga
gaaaatgttatcatttggctgccaactggaggtggaaaaacccgagctgctgtctatgta
gccagaaggcatttggagaccacagcaaatgctaaagtgatggtgctggtcaacaaggtt
catcttgtggaccaacattacaccaaagagtttaagccttatctgggtaatggttataga
ctcatgaaagtcagtggtgacagccaggagaaggatttcttcgggatagtggtgcaggac
aatgacgtgatcatctgcacagcccagatcctgtataatgctttgatcaacaaggaggag
gcaaaacacgttgagctctcagatatcactctactgataatcgacgagtgccatcacacc
cacaaggagtcagtctacaacaaaataatgagatgctacgtggagaaaaagctgaaagga
caacgacagataccacagatcctgggtctcactgcctcacctgggacaggaggtgcaagg
gacctggaagatgctgtgaatcatgtgctggagatctgtgccaacttagactcagttatt
gtctcaactaaaaactacactccagagctggaggagaaggtgccccggccccaaaagacc
tttgacattgtggagaagagagcagcagacccatttggagaccatatcaagtggatgatg
cagcagattcacggattcatgaaccttccttctgacgtgaggcttagagagtgtggcaca
caagaatatgaggcagatgttgtgattctggagcaacgaggagttagagaggacaacagg
ctcttggcacaatgcgcactccatctgagacagtataatgacgctctactcattaatgac
acgctgcgaatgatggatgcatatcgctctttggaggaattctacaacacaaaagtcact
acggccattgatgggacagattacttcctggtgggactttttcaagagaatcaggtggag
ctgaagaattttgctacagattcccgctttgagaacccaaaaatggcaaaacttgagagc
actctccttggccagtttggtccagatgtccagtctcggggcattcttttttccagaact
cgcaggagcacccactgcctcctcgactgggtccagaagaaaaggacattgcagaaagcc
gggataaaggctgccatccttacaggggctggtaatggcatcacttatatgacacagaat
gagcaagcagacacaatccgcaacttccgaaatggtacactgaacctcctgatctccacc
agtgtggctgaggaaggcctggacatccctgaatgcaacctggtggtacgatatggactc
cttacgaatgagattgcacagcagcaggccagtggacgtgcccgagcaagggacagccag
tattcagtggtcgcccaagaaggcggacgggagatccgccgagagcgcatcaacgaatac
ttggaagagctgactggaaaagccatcgctagggtccagagtatgagtgagcatgagttc
cgcagaaagaccaatgaaattcaaacacagaccattattatgaataaagttttacaagat
cgtaaaacggagaagaagaaccgacatgctgcttctagcatcaggatcttgtgcagaaac
tgttttgcacaagtggcatctgggagtgactttaaactccttgaaaatgcgcactatgtc
aatgtaaatcctgactttaaaaatcactacaaactgggtggaaaggtggtgctagagaaa
cgttttgaggactgggagcctggatgcacagtcagctgtaataatggcaactgcaacaag
gattggggatttgaaatgaaatacaagaaggtagccatacttccaaatcttgccatcaag
aactttgccttggagacacctgaaggaagggtcacagttaaaaagtggaaggatgttcct
tttatggtcgaggagtttacatttgaacagtactgcaatgaccacttcccagacttgttt
ggttaa
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