Xiphophorus hellerii (green swordtail): 116735277
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Entry
116735277 CDS
T07363
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116735277
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116735277
Membrane trafficking [BR:
xhe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116735277
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116735277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
GAS
TolA_bind_tri
TPR_MLP1_2
BLOC1_2
Trimer_CC
DUF4515
DUF4200
HALZ
DivIC
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
116735277
NCBI-ProteinID:
XP_032442923
LinkDB
All DBs
Position
16:complement(4586063..4597620)
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AA seq
449 aa
AA seq
DB search
MESQRVQSSYRKRFGPQGGSGARIGSLSSNRLSWHGTPRSITLSSPISRLSLGSASTALL
LGSPGDRLDFSADSLMKAHYKEIRTNEKMEMMGLNDRFASYIEKVRLLEQQNKMLVAELN
QLKVKEPSRLGDIYQDELRELRRQVDGLTNGKARLEVERDNLAADLAMLKQRLQDEMTLH
QEAENSLNTFRQDVDEAALSRVQLERKIEALQDEINFLKKIHEEELRELQDQLVAQQVHV
DLDVSKPDLTAALRDIRVQYENMATSNMHETEEWYRSKFADLTDAANRNAEALRQAKQDA
NEYRRQVQALTCDLDALRGTNESLERQLRELEDRSAMEAAGYQDTVSRLEEEIQALKEEM
ARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETNLDTKTPEAH
VKRSILVRTVETRDGEIIKESTTEHKDLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagagggtccagtcctcgtacaggaaacgttttgggcctcagggcggctcg
ggcgccagaatcggtagcctgtcttccaaccgcctctcctggcatggcaccccgcggtcc
atcaccctctccagccccatttccaggctctccctgggctctgccagcacggccctgctg
ctggggagccccggcgaccggctggacttctccgccgactccctgatgaaggcccactac
aaagaaatacgcaccaatgagaagatggagatgatgggcctgaacgaccgctttgccagc
tacatagagaaggtgcgcttgctggagcagcagaacaagatgttggtggcggagctgaac
cagctgaaggtgaaggagcccagccgcctgggagacatctaccaggatgagctcagggag
cttcggcggcaggtggatgggctcaccaacgggaaggcccgattggaggtcgagagggac
aacctggctgccgatctggccatgttgaagcaaagacttcaagatgagatgactctgcat
caggaagcagaaaacagtttgaacactttcagacaggatgtggacgaagcggctctcagt
cgagtccagctggagaggaagattgaagctctgcaggacgagatcaacttcctgaagaaa
atccacgaggaggagctgcgtgagctgcaggaccagcttgtggcccagcaggtccatgtc
gatctggacgtgtccaaaccggatttgactgcggctctgagggacatcagagttcagtat
gagaacatggccacgtccaacatgcatgaaaccgaggagtggtaccgatccaagtttgct
gacctgacagacgcagccaatcgaaatgcggaggccctgcgccaagcgaagcaggacgcc
aacgaatatcggcgtcaggttcaggctctgacctgcgacttggacgctctcagaggcacc
aacgagtctctggagcgccagctgcgggagctggaggaccgcagcgccatggaggctgcc
gggtaccaggacacggtgagccgcctggaggaggagatccaggccctgaaggaggagatg
gcccggcatctgcaggagtaccaggacctcctcaatgtcaaactggctctggacatcgag
atcgccacctacaggaaactgctggaaggagaggagagcaggatcaccattccagttcag
agcttttccaacctgcagtttagagaaactaatttggacactaaaactccagaggctcat
gtgaagcgaagcatcctggtccgaactgtggagaccagagacggggagatcattaaggag
tcaaccactgaacacaaagaccttccttga
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integrated database retrieval system
