Xiphophorus hellerii (green swordtail): 116735342
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Entry
116735342 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04137
Mitophagy - animal
xhe04144
Endocytosis
xhe04340
Hedgehog signaling pathway
xhe04350
TGF-beta signaling pathway
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116735342
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116735342
04350 TGF-beta signaling pathway
116735342
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116735342
04137 Mitophagy - animal
116735342
09144 Cellular community - eukaryotes
04520 Adherens junction
116735342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116735342
04121 Ubiquitin system [BR:
xhe04121
]
116735342
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116735342
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116735342
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116735342
Autophagy
Mitophagy
Other mitophagy associated proteins
116735342
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
HECT type E3
116735342
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116735342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
116735342
NCBI-ProteinID:
XP_032443051
LinkDB
All DBs
Position
16:complement(20589721..20662468)
Genome browser
AA seq
770 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTASPPSDGNQRAQERRVRSQ
RHRNYMSRTHLHMHPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRGGGESQNVSR
QNQTKEQVQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPIT
LDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVSQDNK
KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWK
SNTRLKHCTPDTSIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLF
TIHQIDASTNNLPKAHTCFNRIDIPPYETYDKLYDKLLTAIEETCGFAVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaatggccccgtcaaactgagattaacagtcctgtgt
gccaaaaacctggcaaagaaagacttcttccgcctccccgatccgtttgccaaggttgtc
gtggacggttcaggccagtgccactccacagacactgtgaggaatacgcttgaccccaag
tggaaccaacactacgatctgtacatcgggaaatcggattcaatcaccatcagtgtgtgg
aatcacaagaagatacataagaagcaaggggctgggttcctgggctgtgtccgccttctg
tctaacgccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagctg
agccccaacgacagtgacacagtccgggggcagattgtagtgagcctgcagtcgagggac
cgcatcggcaccggaggccccgtggtggactgcagtcggctgttcgacaacgatcttcca
gatggctgggaggagaggaggacggcgtctggacggatccagtacttgaaccacatcaca
cgcaccacgcagtgggagaggccgaccaggcccgcgtcggagtactccagccctggacgg
ccgctcagctgcatcgtagacgagaacacgcctgttagcacgaacggcgccacgcccacc
accgcgtcgcctccgagcgacggcaaccagcgagcccaggagaggcgggtgcggtcgcag
cggcaccgcaactatatgagcagaacccacctgcacatgcacccggaccttcctgaggga
tacgagcaaaggacgacacagcaaggtcaagtttacttcctccacactcagacgggtgtc
agcacatggcatgaccccagagtacccagagacctgagcaatgtgaactgtgaggaactc
ggtccgctgccgccgggatgggagatccgcaacaccgccacagggagggtctactttgtc
gaccacaacaaccgaaccacgcagttcaccgacccgcgcctctccgctaacctgcatctg
gtcctaaatccaagttccaacggttctcgaggaggcggcgagagtcaaaatgtcagccgt
cagaaccagacgaaggagcaggtccagcaggccctggtgtccccgggccagctcccagaa
gaggccgagtgtctcaccgtgcccaagtacaagcgagacctggtccagaagctgaagatc
ctgcgccaggagctgtcccagcagcagcctcaggccggccactgtcgcatcgaggtgtcc
cgcgaggagatctttgaggagtcgtatcggcaggtgatgaagatgaggccgaaggacctg
tggaagaggctgatggtgaagttcaggggtgaagaaggcctcgactacggaggagtggcc
agggagtggctctacctgctgtcgcatgagatgctgaacccgtactacggcctgttccag
tactcccgcgacgacatctacactctgcagatcaacccggactccgccgtgaatcctgag
catttgtcgtacttccacttcgtagggcgcatcatggggatggctgtgttccacggccat
tacatcgacggcggcttcaccctcccgttctacaagcagctgctgggtaaacccatcacc
ctggacgacatggagtccgtcgacccagacctgcacaacagcctggtttggatcctggac
aacgacatcacgggtgtgctggaccacaccttctgcgtggagcacaacgcgtacggcgag
atcatccagcacgagctcaaacccaacggcaagagcatccccgtctcccaggacaacaag
aaggagtacgtccgcctctacgtcaactggcgcttcctgcggggcatcgaggcgcagttc
ctggcgctgcagaagggcttcaacgaggtcatcccccaacacctgctcaaggccttcgac
gagaaggagctggagctgatcgtgtgtggcctggggaagatcgacatcaacgactggaag
tccaacacgcggctgaagcactgcacgccggacaccagcatcgttaagtggttctggaag
gccgtggagtctttcgacgaggagcgccgggcccgactgctgcagttcgtcaccggatcc
tccagggttcccctgcaggggttcaaggcccttcaaggcgctgcagggccacgactcttc
actatacaccagatcgatgccagcaccaacaacctgcccaaagcccacacctgtttcaac
cgaatcgacattcctccctacgaaacctacgacaaattgtacgacaagttgctcactgcc
atcgaggagacgtgcggcttcgccgtggagtga
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