Xiphophorus hellerii (green swordtail): 116735658
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Entry
116735658 CDS
T07363
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04148
Efferocytosis
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116735658
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116735658
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116735658
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116735658
04091 Lectins [BR:
xhe04091
]
116735658
CD molecules [BR:
xhe04090
]
Proteins
116735658
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116735658
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116735658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
Ig_C17orf99
I-set
V-set
V-set_CD47
Glyco_hydro_123_N_2
C2-set_2
T9SS_plug_1st
Motif
Other DBs
NCBI-GeneID:
116735658
NCBI-ProteinID:
XP_032443577
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All DBs
Position
16:complement(16574537..16583863)
Genome browser
AA seq
797 aa
AA seq
DB search
MGSRPPGLLLLLCSLLLILKCARGESSYIIDTVGLSILPKDNVQSGTKVMIRCEARVSSS
NISHLEYLFKFMRDGVEIHTEHTTKDSTYYEINPARAVDSGNYQCQVSVKNKRKVSNTTT
LDVKGLQTPILHLNNSTPYESEEFKVTCSVPDEKGGFTFNFYKTFRGGQPQRIKKQQSTN
NFLETTLTLSHIGDCFLSCDYEISLVSGPTSSNISNEIQVKVKELNIIPDMTILPNDIYE
PDIVEVTCKVQIHLADIEIFLVKDRTVLSRTTGKTLIHRFSPKPTDSGELVCKAEWRNVQ
KENYKTIKVKEVFSKPQLYLEPVGLFEGERFRLNCSVKVFFPEMIAKPLKYRLYKDGTEL
TSSTTYIAVAHPNRNGNYSCKVEGNRISTPFHKESEAVIVKAKVPVSDPVLSVVGGKIFI
GKRFQLICHSHTGTFPIKYTLFTHNGNKMSREVSRPEDRATFDIPPIYKISDLKTFLCHA
SNNPRTPSKRALGEHLLKSTNIIEPISKPELTIHPSQDITEGQSIKLVCSVQTGSRPINF
TWYHQESNGALASLSTNKLEEYHSISNANKKHSGKYYCTSTNPADESKWSESVTIEVKMA
GWKKALIIVFCFVLLLILFLVIALKTRLFHFKRKRKANLSVKSVSTKVERLSLTQAEVID
ANATPTMMGKSVWSDQVSGSGGYESDDQNSSMLPEKKAEPEYTEVQIKDADPTRAPAKQG
TENIYSEVRNSQQGVPEVPDGKPVEYAQLNHDGNHQPDNSRVVDQSLKRENITDSENNTD
VYTGDPEEGTCDPAPDC
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggctccagaccccctggactgctgctgcttctctgcagcctcctcctcatcttgaag
tgtgccagaggagagtcatcatacattatagatactgttggtctctcaatcctgcctaaa
gacaatgttcagagtggaaccaaggtgatgattcgttgcgaagcacgcgtcagttccagc
aacatctctcatctggaataccttttcaagtttatgcgggatggcgtcgaaatccacacg
gaacacaccacaaaagactctacttactatgagatcaacccagccagggcagtcgactcg
ggaaattaccagtgccaagtctctgtgaagaacaagcgcaaggtcagcaacaccacgacg
cttgatgtcaaaggcctacaaactcccattctccatcttaataattcgacaccctatgaa
agtgaggagttcaaagtcacctgcagtgttccagacgagaaaggaggttttacattcaac
ttttacaaaacatttagaggtggacagcctcagcggataaagaagcaacaaagcactaat
aactttctagagaccactctgacactcagccacataggggactgctttctgtcctgtgac
tacgagatcagtttggtctcaggtcccacaagctctaacatcagcaatgagattcaagtg
aaagtcaaagagctcaacatcatcccggacatgactatattacccaacgatatctatgaa
ccagatatagtagaagtgacctgtaaagtacagattcatttagcagacattgaaatattc
cttgtaaaggaccggactgttctcagtagaaccacggggaaaactctcattcatcgattt
agtccgaaaccaacagactctggagagcttgtttgcaaggcagagtggagaaacgtccaa
aaggaaaattataaaaccatcaaagtcaaagaggtattttcaaagccccagctgtatttg
gagcccgtgggcctgtttgaaggagaacgattcagacttaactgttcagtcaaggttttt
tttcctgagatgattgctaaacctttgaaataccgcctttacaaagatggcaccgaattg
accagttcaactacatatattgctgttgcacaccctaatcgtaatggaaactactcctgt
aaagttgagggcaatcgtatttcaaccccttttcataaggagagcgaagcagttattgtt
aaagctaaagttcctgtttcagatcctgtgctgagtgtggtcgggggcaaaatatttata
ggcaagagatttcaactgatctgtcacagtcacacaggcacttttcccatcaaatacacc
ctttttacacacaatgggaataagatgagcagggaggtgagcagacctgaggaccgggct
acctttgacatacctccaatttacaagatctccgatttaaaaacatttctatgccatgca
agtaataatccacgtacaccttctaaaagagctttaggggagcatctactgaagtcaacc
aatattattgagcccatctcaaaaccagagctgaccattcatcccagccaggacatcact
gagggacaaagtataaaactcgtctgctctgtacagacaggcagtcgacccatcaacttc
acatggtaccaccaagagtccaatggagcactggcttccctctcaaccaataaactagaa
gaataccacagcatatctaacgccaataaaaaacactctgggaaatactactgcacgagc
acaaacccagctgatgaatccaaatggagtgaatctgtcacaatcgaagtgaaaatggca
gggtggaagaaagcacttatcattgtcttctgcttcgtacttctcctcatcctcttcctt
gtgattgccttaaaaacacggctttttcattttaagaggaaaagaaaggctaacttgtca
gtgaagtcagtcagcaccaaagtagagcgactgagtctcacacaagctgaggtcattgat
gcaaatgccaccccaaccatgatgggaaaaagtgtttggagtgaccaggtctcaggttct
ggtgggtatgagtcggatgaccagaacagcagcatgctaccagaaaaaaaggctgaacct
gaatatactgaggttcaaataaaagatgcagacccaaccagagctccggcgaagcagggc
acggaaaacatctacagcgaagtccgcaactcccagcaaggtgtcccagaggtgcctgat
ggtaaaccagtggaatacgcacagctgaatcatgacggaaatcaccaacctgacaacagt
cgggtcgtcgatcagagcctgaagcgtgaaaacataactgattctgaaaataacactgat
gtttacactggtgacccggaggaaggaacctgtgaccctgcgcctgactgttga
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