Xiphophorus hellerii (green swordtail): 116735704
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Entry
116735704 CDS
T07363
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116735704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116735704
03012 Translation factors [BR:
xhe03012
]
116735704
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116735704
Translation factors [BR:
xhe03012
]
Eukaryotic type
Release factors
116735704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116735704
NCBI-ProteinID:
XP_032443635
LinkDB
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Position
16:24335544..24351082
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AA seq
578 aa
AA seq
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MDPRDTAPDSWEQEDDVEQEATVDGQLEAAFTTLNVNAKPFVPNVNAAEFVPPFAMRAPT
ENVDAAVVNDKVSTMDVSESSVPVENGDTEMTSEEPWDQKDDEATEEEPGGGDRGPGELT
SPEDTAPEMMEEEEEVLVPKVPAVQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMV
DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPG
HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNK
MDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEATDMCPWYTG
LPFIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHVV
EVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNSDSLCHSGRTFDAQIVIIE
HKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTAG
TICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcctgggaacaagaggacgatgtggaacaagag
gccacagtcgacggacagcttgaagcggcattcacaacccttaatgtgaacgctaagccg
ttcgtacccaatgtgaacgcagctgaatttgttccgccttttgccatgagagcgcccaca
gagaacgtcgatgctgctgttgtgaatgataaagtctccaccatggacgtgtcagaaagc
agcgtgcccgtggagaacggtgacacagaaatgacgtcggaggaaccatgggaccaaaaa
gatgacgaagcgaccgaagaggagccgggaggtggggaccgggggccgggggagttgacc
tcgccggaggacacggctccagagatgatggaggaggaggaggaggtgttagtgccaaag
gttccagccgtacagccagacgcccccaagaaggaacacatcaatgtggtgttcatcgga
cacgtagatgctggaaaatccaccattggaggacaaattatgtatctaacaggcatggtg
gacaagaggaccttagagaagtacgagagggaagccaaggagaagaacagagaaacctgg
tatctgtcctgggctttggacaccaatcaagaggagcgggacaaggggaagactgtggag
gtgggccgagcgtactttgagacggacaaaaagcactttactatcctagacgctccaggc
cacaaaagctttgtgccgaacatgattggaggcgcgtcccaggctgatctggctgttctg
gtgatctctgccaggaaaggtgagtttgagactggtttcgagaagggcggacagacccgg
gagcacgccatgctagctaagacggccggtgtcaagcacctgatagtcctggtcaacaag
atggatgaccctacggtcaactggagtctggagaggtatgaagagtgcaaggagaaatta
gtgccattcttgaagaaagtgggctttaacccaaagaaagacatccacttcatgccgtgt
tctgggctcaccggagccaacctgaaggaggcgactgacatgtgcccctggtatacaggt
ttgcccttcatcccacacttggacagtttgccaaatttcaacagatctagtgatggacca
gtcagattgcccattgtagacaaatacaaggacatggggactgtggttctgggaaagctg
gagtctggctccatcagtaaagcacaacagctagtcatgatgcccaacaggcatgtggtg
gaggtattgagtctgctatcagatgacgtggagacggacgatgcaggacctggtgaaaac
ctcaagctgcgactgaagggaatcgaggaggaggagatcctgccgggatttattctgtgc
aactctgacagtctctgtcattcagggcgcacctttgacgcccagatcgtcatcatcgaa
cacaaatccatcatctgtccaggttacaatgcagtccttcacattcacacatgcattgaa
gaagtgcaaatcacggccttgatctgtctagtggacaagaagacaggagacaagagtaag
acgcggccccggttcgtcaaacaggaccaggtctgcatcgcccgtctgcgtacagctggg
accatttgcctcgagacttttaaagactttcctcagatgggacggttcactttacgggat
gaaggtaagaccatcgccatcggtaaggttctgaagctggtggctgagcgggactga
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