Xiphophorus hellerii (green swordtail): 116735719
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Entry
116735719 CDS
T07363
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116735719
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116735719
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116735719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
PilJ
IMD
DUF713
MutS_III
TPR_MLP1_2
Apolipoprotein
WHD_MCM8
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
116735719
NCBI-ProteinID:
XP_032443663
LinkDB
All DBs
Position
16:11207720..11213378
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AA seq
497 aa
AA seq
DB search
MTTTSTDVEENLREKVEDRPPATPLRQDVMCDSCMDAPSRALKSCLTCLVSYCEAHLRPH
LEKDKFQNHRLVDPLHDIERQTCEVHQLLFKSFCFLDECSICGDCEGQEHEGHEILSLEE
ARVHFETELLQKHQRISQHVSDVERIIGKLQSNGDLIKSSAQEVCVTVEQQFNRLQKTVE
EARKRVEALLEGEQKQALRQGESIQAHLEQKRVELMKTADKIKKLSKSKSDVDFLKDYTE
GKKGLIDICVSTVHISRMHHLHSWAQAVTDVTQELCDLIMESYSEKMNMVSKSAGAKHAM
PESLPSTLPDPETQEDFLTYTTRLTFDPDTTHYFLRLTVDNRKLTNTSPWRHSYPDHPSR
FEYWRQAMTSESLYLGRHYIEAELSGVGTHVGVAYRSIDPKGEESGSCITGNDFSWCVGR
NNRGFSAWHAGEETPLEASDIARVGIYVDFHRGLVSFYNTTGPMMLLHTYNTDFIEPLYI
TAWLSKKDNVVTLVNAK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccagcacagatgtcgaggagaacttgagggaaaaagtggaggatcggcca
ccagccacaccactgcgacaagatgtgatgtgtgattcctgcatggacgcccccagcaga
gcgcttaaatcctgtctgacttgtctggtctcctactgcgaagcccacctcagaccccat
ctagagaaagacaaatttcagaaccatcgcttagtggatcccctccatgacatcgagcgc
cagacttgtgaagttcatcagcttctcttcaagagcttttgctttctggatgagtgctct
atctgtggggactgcgagggtcaggagcacgaaggacacgagatattgtctttggaggag
gctcgagtacactttgagactgaacttctgcagaaacaccagaggatcagtcaacatgtc
tcagatgtagagagaataattggaaaattgcagagcaacggtgatttaatcaagtcttca
gcgcaggaggtttgtgttactgttgaacagcagttcaataggctgcagaagactgttgag
gaggccagaaaacgggtagaggcgcttttggaaggagagcaaaaacaagctctgagacaa
ggggagagcattcaggcacatctggagcagaagagggtggagctgatgaaaactgcagat
aagattaagaaactatccaagagcaaatctgatgttgatttcctaaaggattacacagag
gggaagaaaggactgatcgacatatgcgtgtccactgtgcacatcagtcgaatgcaccat
ctacattcatgggctcaagcagtgactgatgtaactcaggagttatgtgacctgattatg
gagtcctacagtgaaaaaatgaacatggtctccaaaagtgcaggtgctaaacacgcgatg
ccagaatctctgccatctactcttcctgatcctgagacccaggaagacttcttgacatac
acaacgaggttgacctttgaccccgacactacccattacttcctgcgtctaacggtggac
aacagaaagttaaccaacaccagcccctggcggcacagctacccggaccaccccagccgc
tttgaatactggcgtcaggccatgacttcagagagcctctacctggggagacattacatc
gaagcagagctgagcggagtgggcacacatgtcggggttgcctacaggagcatcgatcct
aagggagaggaaagtggcagctgcatcaccgggaatgacttttcttggtgcgttggaagg
aacaacagaggtttctctgcctggcatgctggggaggagacacccctggaagcctctgat
atagcaagggttggcatatatgttgactttcatcgaggtttggtgtctttctataacaca
acagggcctatgatgctgctccacacatacaacactgactttatagagcccttatatata
acagcctggttgtcaaagaaagacaatgttgtgactctggttaatgcaaaatga
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