Xiphophorus hellerii (green swordtail): 116735720
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Entry
116735720 CDS
T07363
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116735720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116735720
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116735720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_2
SAM_7
FAM199X
Motif
Other DBs
NCBI-GeneID:
116735720
NCBI-ProteinID:
XP_032443665
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All DBs
Position
16:11200130..11206960
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AA seq
469 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVARGGNPDK
CDIWGNTPLHLAAANGHLDCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKQTGLNPKLVGKLKDRAFRDAERRIKECAKMQKKHRIRMERKFHKETSEASASDVMSF
SSYTGSSVSHKLRNFSTATISVPYSQATLHATNRGKTKIQKKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYINPKDRGRRNVRDMFPRDNDDAISRAMSEPDLLGPDM
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFNLGARDTTRSGNNVRLRSRLQHYPS
IDEDSIGSARSLQERNMEELPWEEVELGLDDDDEPDTSPLEVFLATLSMSEFYSIFKREK
IDLEALLLCSDQDLKSIHIPLGPRKKLLDACQRRLETMEDPDSIEDTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggacggctacctggacctgctgaaggaggcg
acgaggaaggatctgaacgcgccggacgaggatggcatgacaccgactttatgggcggcc
taccacggcaacctggaggctctgcggctgattgtggccaggggaggcaacccagacaag
tgtgacatatgggggaacacaccactccacttggcagctgccaatggtcatctcgactgc
cttttcttcctggtgtctttcggtgccaacatatggtgcctagacaatgactaccacaca
cccctggacatggccgccacgaagaaccacatggactgtgtccgctacttggattccatc
gctgccaagcaaacggggctaaatccgaaactggttggtaaactgaaggaccgggcattt
cgtgatgctgagcgacggatcaaagagtgtgctaagatgcagaaaaagcaccgcatacgt
atggagcgaaagtttcacaaagaaacctctgaggcttccgcttcagatgtcatgagtttc
tccagttacactggcagctctgttagccacaagctacgtaactttagcacagccactatc
agtgtgccatattctcaggcaactctccatgccacaaaccgagggaagacaaagattcaa
aagaagctggagaagaggaagcaaggagatggaacttttaaaatttacgaagatggaaga
aagagtgtgcgctccctttctggacttcagttaggtaatgatgtcatgtttgtcaagcag
gggacttacatcaacccaaaagacagagggcgtcgaaatgttcgagatatgttccctaga
gacaatgacgatgccatttctcgtgccatgagtgagccagaccttcttggaccagatatg
gactactctgagatcagcaccgactccggacatgattccctgtttaacagaccgggtctg
ggcaccatggtctttagaagaaactacgtaagtggaggaatgttcaacctcggtgctcga
gacacgacccgctcaggtaataatgtgcgtttacgcagtcggttgcagcactatccaagt
atagatgaagacagcattggaagcgcacgcagcctgcaggaaagaaacatggaagagttg
ccttgggaagaagttgaattagggttagatgatgacgatgagcctgatacaagccctctg
gaggtcttccttgccacactaagcatgagcgagttttactccatattcaaaagagagaag
atcgacttagaagctctcctgctttgctctgatcaagaccttaagagcattcatatcccg
ttagggccaagaaaaaagctattggatgcctgccagagacgactggagaccatggaggac
ccagactccattgaagacaccgaattgtaa
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