Xiphophorus hellerii (green swordtail): 116735745
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Entry
116735745 CDS
T07363
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00260
Glycine, serine and threonine metabolism
xhe00630
Glyoxylate and dicarboxylate metabolism
xhe00670
One carbon pool by folate
xhe01100
Metabolic pathways
xhe01200
Carbon metabolism
xhe01230
Biosynthesis of amino acids
xhe01240
Biosynthesis of cofactors
xhe04981
Folate transport and metabolism
Module
xhe_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116735745 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116735745 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116735745 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116735745 (shmt1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116735745 (shmt1)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
116735745
NCBI-ProteinID:
XP_032443706
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Position
16:complement(19167867..19175701)
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AA seq
482 aa
AA seq
DB search
MSLTNGHRVGKETWDSHNKMMLEPLSVSDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAFGLNSEKWGVNAQPYSGS
PANFAVYAAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDKLQENARLFHPKLIIAGTSCYSRNLDYGRLQQIASENGAYLMGDMAHISGLVAAGVV
PSPFDHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQALTPEFKTYQLQVLANCKALSSSLMDLGYKIVTGGSDNHLILLD
LRNKGTDGGRAEKVLEACAVACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEEDFKKVA
HFIHRGIELTLEVQRSLDPKANLKEFVQALAQGEKFQQRVSEVRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaaacggtcacagggtgggcaaagaaacatgggactcccacaacaagatg
atgctggagcctctgtccgtcagcgactcagaggtgttctccatcataaagaaggagaag
cacaggcagacgtacggactggagctgatcgcttcggagaacttcgccagcagagcggtt
cttgaagctctcggttcctgcatgaacaacaagtactctgagggctaccccggccagcgg
tactatggtggaactgaacatgtcgatgagctggaaaggctttgccagaagagggcgctg
gaggcctttggtctgaactctgagaagtggggagttaatgcacagccgtactcaggttcc
ccggccaactttgcggtctacgccgctgtggtggaaccgcacggccggatcatgggcctg
gaccttcccgacggcggccacctcactcacggcttcatgaccgagaagaagaaaatctca
gcaacgtccatcttctttgaatccatgccctataaggtgaacccagaaaccggctacatt
gattatgacaaactgcaggaaaatgcccggctgttccacccaaagctcatcatcgcagga
acaagctgctattcccgtaaccttgactacggccgcttgcagcagatcgccagcgagaac
ggcgcctatctgatgggggacatggctcacatcagtgggctggtggcagccggggtcgtg
ccctcgccctttgatcactgtgacatcgtcacgacaacgactcacaaaactctccgcggc
tgccgtgccgggctcatcttctatcggaaaggggtacggagtgtggacgccaaaggcaaa
gagacgctgtacaacttggagtctttgatcaaccaggctgtgtttccagggctgcaggga
gggccacacaaccacgctattgcaggtgttgccgtggctctgaaacaagccttgactcca
gagtttaagacttaccagctgcaggttcttgctaactgcaaagctctgtccagttccctc
atggacctcggctacaagatcgtcactggcggttctgacaaccatttaatcctgctggac
cttcgcaacaaaggaacggacggaggacgagctgagaaggtcttggaggcctgcgccgtc
gcctgcaacaagaacacctgtccaggcgataagagtgctctgcgtccaagcggtctgagg
tttggctctccggctctgacctccagaggaatggttgaggaagacttcaagaaggtggcc
cacttcattcatagaggtattgagctgactttggaagtgcagagaagtctggaccccaag
gccaacctgaaggagttcgtccaggcgttggctcagggagagaagttccagcagcgggtg
tcagaggtcagggcggaggtggaggccttcgccggccagttccccatgccgggccttcct
gaactgtag
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