Xiphophorus hellerii (green swordtail): 116735810 Help Entry 116735810         CDS       T07363                                  Symbol casc3 Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03013   Nucleocytoplasmic transport xhe03015   mRNA surveillance pathway xhe03040   Spliceosome Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116735810 (casc3)   09122 Translation    03013 Nucleocytoplasmic transport     116735810 (casc3)    03015 mRNA surveillance pathway     116735810 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:xhe03019]     116735810 (casc3) Messenger RNA biogenesis [BR:xhe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      116735810 (casc3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  116735810 NCBI-ProteinID:  XP_032443814 LinkDB All DBs Position 16:complement(2928892..2938258) Genome browser AA seq 768 aa AA seqDB search MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATKARGREPVPVEAPVSRSEAKSEVES ECESEDGAGEAVLSDYDSADPEENASHSEGGEEEEEGFSEEEAPAAASEPKPAAADGPTQ DDGEEKDKEEEEEQEEEEEEEEAGGSSKEESKAEEKGNLAGERQSGDGQESTDDPETKPG QQLDDDEDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRNRKLWKDEGRWEHDKFREEEQ APKSREELIAIYGYDIRNGGGSGPGDRAYRQRRPRQSSPPGRDKRWRDGQRPARTWQNRG GVPPPPSSVPPPSSSSAFPPLSAAQRSNNSSRPPPSRSRPPHYSQVHPLSQSEYRNNESN APQVHPRERHAPKTQLDPSGDRGGAGRSGRGHGGRGGSSVVIEEVSDGQSGAAEEDSRSD SAATAAARQPGGYQSPRRQHQEQRGSGDRAASGLAASTSDPALQSSAANREASPPAERPV ERKSYSLARRTRSRPSDLGSKQASVEESAAGGNSSSPSSGGGKGWTGGSDGGSQTAAGGG GVAELDQEVARLNLVRQTWSQSPTSYVRSEMRGLPNPIHMASGPPQYSNMEEMGVGSNRA KRYSSQRQRAVPEPAPPMHLGVMETGHYYEPMSYQGPIYTHGEGPAPIPPQGMLVQPEMH IPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPAMYPSPQ GQTQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEVPYASE NT seq 2307 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcggcggaggaggaggcgcgcgtctcaggacagcgaggacgacgacgag tccggctcgggttcggacagtgggaggtccggttctccagcgacaaaggcccgaggccga gaacccgttccggttgaggcgccagtgagccggtccgaggcgaaaagcgaagttgagtcc gagtgtgagagtgaagacggagcaggagaagccgtcctctcggattacgacagcgccgat ccggaggagaacgcttcccactcagagggaggagaggaggaagaggagggtttcagcgag gaagaggctccagcagcagccagcgaacccaaacccgctgctgctgatggacccacacag gatgatggagaggagaaggataaggaggaagaagaggaacaagaggaggaggaggaggag gaagaggcaggagggtccagtaaggaggagagcaaagcagaggagaagggaaacctggca ggagagaggcagagcggagatggacaggagtccaccgacgacccggagacgaagcctggt cagcagctggacgacgacgaagaccggaagaacccggcttacattcccaggaagggtttg ttcttcgagcacgacgtccgcggacagactcaggaagaggagaggcctaaaggtcggaac aggaagttatggaaggacgagggccgctgggagcacgacaagttcagggaggaagagcag gcgcccaagagccgcgaggagctcatcgccatctacggctacgacatccggaacggcggc ggcagcggccctggagaccgggcgtacaggcagcgcagacccaggcagagttctcctccc ggcagagacaagcggtggagagacgggcagagaccggcccggacctggcagaaccgagga ggagtaccacctccaccttcatctgtccctccaccctcctcttcctcagcgtttcctccc ctctctgctgctcagcggagcaacaactcctccaggccgccgccctcccgcagcagaccc cctcactacagccaagtgcacccgttgtctcagtcagagtacaggaacaatgaatccaac gcacctcaggttcatcccagagagcggcacgccccaaaaactcaactggacccgtcggga gacagaggcggggccggtagaagtggacggggccacggaggaagaggaggctcctctgtg gtcattgaggaggtttcagacggccaatcaggcgcagcggaggaggattcgaggtcagac tctgcagcgacggctgcagcaaggcagccgggcgggtatcagtcaccgagacgacagcat caggaacaaagaggcagcggggacagagctgcctccggattggctgcctccacctctgac cccgccctccagtcttcagcagccaatcgggaagcctctccaccggctgagcgccccgtt gaacgtaaatcgtactctctggcccgcaggactcgctcgcggccgtcagacctcggcagc aagcaggcctcagtggaggagtcagcagcggggggaaacagctcctcacccagcagcgga gggggcaagggctggacggggggcagtgatgggggaagtcagacagcagcgggcggggga ggggtcgccgagctggaccaggaagtggcccggctcaatctggtccgacagacctggagt cagagtccaacgtcgtacgtacgctccgagatgagaggtcttcctaaccccatccacatg gccagtgggccgcctcagtactccaacatggaggagatgggcgtgggctccaaccgggcc aagcgttactcctcccagcgtcagagagccgttccagaaccggccccgcccatgcacctg ggagtgatggagactggacactactacgagcccatgtcgtaccagggaccaatctacacc cacggagaaggccccgcccccatcccgccccagggcatgctggtccagccagagatgcac atccctcatcctggtctccatccccaccaatcaggaggccccatcgctaaccccgccctc tacggaggcccacctgtctccctgtcaccggggcaaccacagcagctgctgcctcctccg ttctaccctcctcctggggtcatgaccttcccctaccctgccatgtatccaagcccacag ggtcagacccaggtgacgtacggcggcgtcacgtactacgacaccatgcagcagcaggct cagcccaaaccgtcgcccccccgccgcacctctcagcccgtcaccgtcaaacccccccct ccagaggttccctacgcctcagagtga

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