Xiphophorus hellerii (green swordtail): 116735835
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Entry
116735835 CDS
T07363
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116735835 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116735835 (abca3)
Transporters [BR:
xhe02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116735835 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
AAA_30
RsgA_GTPase
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
116735835
NCBI-ProteinID:
XP_032443864
LinkDB
All DBs
Position
16:complement(12344167..12368755)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAIARQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFQDYPNATIYESF
PVNILPSRISRDLQLGYVPSNSSVVRQVAEDVRGSLSLHSVRGFETEEQFEKHVRTDPQS
HQILAAVIFEHSFAHDDEPLPLQVSYHLRFTFTPRNAPPREKSELSPNSDLDWHTLSLFP
LFQLPGPREQHDKDGGTPGYYREGFLAVQHAVDKAIMRSHNSTGADRLLKQTRVVLSRFP
YPSFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTLLLCIRVSPNGAVLNNSDPTLVFVFLLVFTVATINYSFMISA
FFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGMFE
GKGTGIQWSNLFDSVTVDDDFSMAQVLCLLLFDSVLYGLVAWYMEAVFPGEYGVPLPSYF
FLLPSYWCSSPRMAMVNEKEEDEDAEKAMKGEFIEEEPAGVVSGIKIKHLTKEFKVGNKT
RQAVRELTLNMFEGQITVVLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGFSKEQISDEVDRIICILNLEDKRHSRSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDSLCNVSEITRLVHMYVPNAT
MESSAGAELSYILPKESTSRFELLFAELEMNKEELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWTTDDASSISGLTDVTDFTDSGTLISDDGSNIKLNTGV
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVARTLPNHQDAPLLRLALS
HYGPTRVPVALQPGAGSLSSSLAEMYTSQLPAQLGELRNITDFTNYVLTNAKAEGGIFNE
RCVVGAAFLGRSNHYSEATAYFNNQGYHTPATALMMVDNALFKLLAGPNASILTGNYPMP
RNLSETARSQLTDSKTGFAIAINLMYGMASLSSTFALLLVTESAIKSKHVQQVSGVYLSN
FWFSALLWDLVNFLLPCLLMLVVFQAFGVEAFVADHHLIDVLLILLLYGWAIVPLMYLLS
FFFSTAATAYTRLTIFNMISGTATFLTVTIMTIPELNLVHLSHLLDKVFLIFPNYCLGMS
FSQFYQNYEFIKFCTSSEISEVICKVLNITYQPNYFSMSEPGVGRFLVSLMVQGVVFNAL
LFVIELQCVRTVCRLFASLGRKRKQVTLLDDAAFLPEDRDVAEERKRVLECQPVVESMVG
SPLILHELSKVYSSGENLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVAGCVENV
LRSLLLEPHADKVTRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHKE
DDLEDGDLQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKALTWAQVFGTLEAAKEKYRIE
DYCVSQISLEQVFLSFAQFQHCTQTDRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgctagacaatttggactgctggtgtggaaaaattatcttcagcaaaaacgt
cagattctggtgacgctggtggagatcctcttgccgctgcttttctctggcatccttatt
gtgctgcgtcagaaggtgccttttcaggattacccaaatgccacaatctatgagagcttt
cctgtcaacattttacccagccgtatttcacgagacctgcagctgggctacgtgcccagt
aactccagcgttgtgcgtcaggtggcggaggacgtccgaggcagcctgtccctgcactca
gtgcgtggctttgagacggaggagcagtttgagaagcacgtccgaaccgaccctcagtcg
caccagatattggccgctgtcatctttgagcactccttcgctcatgacgatgagccccta
cccctgcaggtgagctaccacctgcgcttcaccttcaccccacgcaacgccccacctagg
gagaagtccgaactgagcccaaacagtgacctggactggcatactctcagcctctttccc
cttttccagctgccagggccaagggagcagcatgacaaggatggtgggacaccaggttat
taccgtgagggctttctggcagtccagcacgcagtggacaaagccatcatgcgatcccac
aacagtactggagcagaccgtctgctgaaacagaccagggtggttctgtcacgctttcct
taccctagctttatctatgatgtcttcatcttggccattcagaaccagctgcctcttctc
ttagtgctcagcttcacttacacgtccctcaacatagtgcgagctgtggtgcaggagaag
gaacggaagctcaaggagtacatgaggatgatgggcctcagtaactggctgcactggagt
gcatggttcctgatgttcttccttttcctctccatttcagtgttttttgttactctgctc
ctctgtatccgggtgagtcctaacggtgcagtgctgaacaacagtgaccccaccctggtc
tttgtcttcctgctggtcttcactgtggccaccatcaactacagcttcatgatcagtgcc
ttcttctcacgagccaacgtggcggcagcagcgggcggcttcatctacttcctcagttac
ctgccttatttgttcttgtggcctcgctatgacttactgagccacgctcaaaaagtgtcg
gcctgccttatctccaacgtggccatggccatgggagctcaacttataggaatgtttgaa
ggcaaaggtactggaatccagtggtcaaacctgtttgactctgtgacagtggacgatgac
ttctccatggcccaagttctgtgcttgctgctctttgactcggtgctttacggcctggtg
gcctggtacatggaggctgtgtttcccggagagtacggagtgcctcttccatcttacttc
tttctactgccttcatactggtgcagcagccctcgcatggctatggtaaacgagaaagag
gaagatgaggatgcagaaaaagctatgaagggagagtttatagaggaggagccagctgga
gtagtatctggaataaagattaaacacctcactaaggagttcaaagtagggaacaagaca
cggcaggcggtgcgagagctgacgctgaacatgttcgaggggcagatcacagtggtgctg
ggacacaacggtgctgggaagaccaccacactgtccatgcttacaggtctgtttcctccc
agcagcggtcgggcctacataaatggttatgacatctgtcaggacatggctttgatccga
cgcagtctgggcctctgtcctcagcatgacgttttgtttgacaacctcacagtgagagag
catctgctcttctatgcacagctaaaaggcttctccaaggagcaaatttcagacgaggtg
gatcgtatcatctgcattttgaacctggaggacaagcgacattctcgctccaagaccctc
tctggcggcatgaagaggaagctttccatcggaatcgccctcattggggactccaaggtc
gtcatgctggatgagcccacatcggggatggatccatcagcacgacgggccacctgggac
cttctccagggagagaaacgaggtcgcaccatcctgctcaccactcacttcatggacgag
gccgacctgcttggtgaccggatcgccatcatggcaggaggcgagctgcagtgctgtggc
tcgccactattcctgaagaacaaatatggtgctggctaccacatggtgattgtcaaagat
tcactttgtaatgtatcagagatcactcgccttgtccatatgtacgttcccaatgctaca
atggagagcagcgccggagccgagctctcttacatcctgcctaaagaaagcaccagcagg
tttgagctgctgtttgctgagctggaaatgaacaaagaggaactgggaattgcaagctat
ggagcctcagtgaccaccatggaagaagttttcctcagagttggaaagctggtggattct
agtttggacattcaggcgatccagctgccagcccttcagtaccaacatgagagacgctcc
catgactggaccaccgacgacgccagcagcatcagtggcctgacagatgtcactgatttc
acagacagtggaacactcatctctgatgatgggtcaaacattaaactgaacacaggggtc
agactccacctgcagcagttttatgccatgtttctgaagagggcactgtacagctggagg
aactggaaggtgatggtggctcagttcttggtccctttgatcttcactgttgtggcctta
gtggtggcgcgcaccctccctaaccaccaggacgcccccctgctgaggctggccctcagc
cactacggtcccaccagggtccctgtggccctgcagccaggcgcgggttcgctttcttct
tctttagcagaaatgtatacatcccaactcccggcccaattgggtgagctgagaaacatc
acagatttcactaattatgtcctgaccaatgcgaaagcagaaggcgggatctttaacgag
cgctgcgtggtgggcgctgccttcctcggcaggagtaaccactattcagaagcaacagcc
tacttcaacaaccagggctaccacacacctgccacggccctcatgatggtggacaatgct
ctgttcaaactcctagctgggcccaacgcgtcaatcctgacaggcaattaccccatgccc
agaaacctgtctgagactgcgaggagccagctcacagatagtaagaccgggtttgccatt
gccatcaacctgatgtacggcatggcctcactgtctagcactttcgccctgctgcttgta
actgagtctgctatcaagtcgaagcacgtccagcaggtcagcggcgtctacctgtccaac
ttctggttctctgccctgctgtgggacctggtcaacttcctgctgccatgcctgctcatg
ctggttgtattccaagcgtttggagttgaggcttttgtggcggatcaccacctcatcgat
gttctcctgatactcctcctgtacggatgggccatcgtgcctctgatgtatctgctcagc
ttcttcttctccactgctgccaccgcctacacacgcctgactatcttcaatatgatctcc
ggcacggccacgtttctgaccgttaccatcatgaccatccctgagttaaacctggtgcac
ctgtcacacttattggataaagtgttcctgatcttccctaactactgcctgggcatgtca
ttcagccagttctaccagaactatgaattcataaagttttgcacctccagcgaaatcagc
gaagtcatttgcaaagtcttaaatatcacataccagccaaactacttctccatgtcagag
cctggtgtaggtcgcttcctggtgtccctcatggtgcagggcgtcgtcttcaacgctctg
ctgtttgtcatcgagctgcagtgtgtccgcaccgtctgcaggctcttcgcctctctgggc
agaaaacgcaaacaggtgactctcttggatgatgcggcgttccttccagaggatcgggat
gtggctgaagagaggaagcgggtcctggagtgccagccagtggtggaatccatggtcggc
agccctctcatactgcatgagctcagtaaggtttacagcagcggggagaacctcttggct
gtggacaggctgtctctcgcggtggggaagggtgagtgtttcggcctcctgggcttcaac
ggagcaggaaagaccacgacgtttaagatgctgactggtgacgagagcgtcacatccgga
gacgcctacatagacggctacagcatcctgagggacattaagaaggtgcagcagcgcatt
ggttactgtcctcagtttgatgccgtgctggatcacatgactggaagagagacactgagc
atgtatgccagactcagaggaatcccagagaagtatgtagctggatgtgtggagaatgtc
ctgaggtcgctgctgctggagcctcatgctgataaagtgacccgcagctacagcggcggt
aataagaggaagctgagtgcaggtatggctctgattggtgggcctccggtcatcttcctg
gatgagccttccacagggatggaccctgtcgctcggagactgctgtgggacgctgtcact
cgcacccgggagtctgggaaggccataataatcacctcccatagcatggaggagtgtgag
gccctctgcaccaggctggcagtgatggtaaacggtcagttcaagtgcctggggagtccc
caacacctgaagagcaagtttggcagtggctacacgctgctggctaaagtccacaaggag
gacgatctggaggatggcgacctgcagctttttaaagacttcatcgaaagcaccttccca
ggaagtcaactcaaagatgagcaccagggaatggttcactaccatctgacagataaagca
ctaacctgggcacaggtgtttggcacgttggaggcagccaaagagaagtaccgcattgaa
gactactgtgtgagccagatatctctggagcaagtattcctcagctttgctcagttccaa
cactgcacacaaacggacaggaagtag
DBGET
integrated database retrieval system
