Xiphophorus hellerii (green swordtail): 116735893
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Entry
116735893 CDS
T07363
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116735893
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116735893
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116735893
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
116735893
NCBI-ProteinID:
XP_032443945
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All DBs
Position
16:complement(21528203..21534758)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDDEPQGAPESATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPNVKCAVFFGGLAIKKDEDTLKKNCPHIVVGTPGRTLALIR
NKTLSLKNVKHFVLDECDKMLEALDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRAMVQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacgacgttgacaacgagctgctcgattatgaggaggatgatgagccacaa
ggagccccggagagcgcgacccccgcggggaagaaggaggtgaaggggtcttacgtttcc
atccacagctccggcttcagggacttcctcttgaagccagagctcctccgggccatcata
gactgtggtttcgagcatccgtctgaagtccagcatgagtgcatcccccaggccatcctc
ggcatggacatcctgtgccaagccaagtctggcatgggcaagacggccgtgttcgtcctg
gccacgttgcaacagatcgagcccgttgatggacaggtctctgtgttagtcatgtgccac
acacgagagctggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
aacgtgaagtgcgccgtgttcttcggcggcctggccatcaagaaggacgaggacaccctg
aagaagaactgccctcacatcgtggtcgggacccccgggcggaccctggctctgatccgc
aacaagaccctgagtctgaagaacgtcaagcatttcgtcctggacgagtgcgacaagatg
ctggaggcgctcgacatgaggcgcgacgtgcaggacatcttcaggatcaccccccacgag
aagcaggtcatgatgttcagcgctacgctgagtaaggagatccggccagtctgccgcaaa
ttcatgcaggacccgatggaggtgtttgtggacgacgagaccaaacttacgctgcacggt
ctgcagcagtactactgtaaactgaaggacagcgagaaaaaccgcaagctctttgacctg
ctggacgtcttggagttcaaccaggtggtgatctttgtcaagtctgtgcagcgctgcatc
gctctgtctcagctgctggtggagcagaacttccccgccatcgccatccacagagcaatg
gtccaggaggaaagactctctcgctaccagcagttcaaggacttccagagacggatcttg
gtggcgaccaacctgtttggccgagggatggacatcgagagggtgaacatcgtcttcaac
tacgacatgcccgaagactcagacacctatttgcacagggtcgcccgtgccggtcggttc
ggaaccaaaggcctggccataaccttcgtgtcggacgaaaccgacgccaagatcctgaac
gacgtgcaggaccgctttgaagtcaacgtggccgagctgccggatgagatcgacatctcc
tcttacatcgagcagtccagatga
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