Xiphophorus hellerii (green swordtail): 116735993
Help
Entry
116735993 CDS
T07363
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116735993 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116735993 (cpsf4)
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116735993 (cpsf4)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116735993 (cpsf4)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116735993 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
116735993
NCBI-ProteinID:
XP_032444093
LinkDB
All DBs
Position
16:complement(19160607..19164587)
Genome browser
AA seq
264 aa
AA seq
DB search
MQELLANVDHIKFDLEFAVEQQLGAQPLPFPGMDKSGSAVCEFFMRGACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKACKFMHPRFELPMGTSEQPP
LPQQAQIQTKAASVNRSSLSLIQLTNTSPIQRPQNNINSGVQQNHMSVNRGPRPLDQVTC
YKCGEKGHYANKCNKGHLAFLSGQ
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttactggccaacgtggatcacatcaagtttgacctggagtttgctgtggag
cagcagctcggagcgcagccgctacctttccccggcatggataagtccgggtcagctgtg
tgtgagttcttcatgaggggagcttgtatgaaaggcgggatgtgtccattccgtcacatc
agcggagagaagacggtggtgtgtaaacactggctcagaggcctgtgcaagaagggagac
cagtgcgagtttctccacgagtacgacatgacgaagatgcctgaatgctacttctactcg
aaattcggagagtgtagcaacaaggagtgtcccttcctgcacattgatccagagtcaaag
atcaaagactgtccgtggtacgaccgaggattctgtaaacacggtcccgactgcagacac
agacacacacggcgggtaatctgtgtaaactacctggtgggcttctgtcctgaagggaaa
gcctgtaaatttatgcatcctcggtttgagctgccaatgggaacgtccgaacagcctcct
ctgccacaacaagcacaaattcagaccaaggctgcgtctgtcaaccgctcatcgctctct
ctcatccagctgaccaacaccagtcccatccagcggccgcagaacaacatcaactctgga
gttcagcagaaccacatgtccgtcaacagagggcctcggcctctggaccaggtcacctgc
tacaagtgtggagagaagggccactacgccaacaaatgtaataagggtcaccttgccttc
ctgagcggacagtag
DBGET
integrated database retrieval system
