Xiphophorus hellerii (green swordtail): 116735996
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Entry
116735996 CDS
T07363
Symbol
ccdc47
Name
(RefSeq) coiled-coil domain-containing protein 47
KO
K24962
PAT complex subunit CCDC47
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xhe03110
]
116735996 (ccdc47)
04131 Membrane trafficking [BR:
xhe04131
]
116735996 (ccdc47)
Chaperones and folding catalysts [BR:
xhe03110
]
Other chaperones and cochaperones
Others
116735996 (ccdc47)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
116735996 (ccdc47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
116735996
NCBI-ProteinID:
XP_032444095
LinkDB
All DBs
Position
16:complement(4510857..4519440)
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AA seq
486 aa
AA seq
DB search
MRSAFFLLVPTLLLLLALPAARGRYNDDFDDGEDLADFDDNDFAEFEDMNDDLTAEAETA
PPPRVSSPSSQTEDDEDEATVELEDGQDGFEDSDTQDEDMYSKYDKDEFEGMEKTGHSMK
DPLIIHTVPAHLQNSWESYYMEILMVTGLLCYIMNYIIGKNKNSRLAQAWFNSHRELLES
NFALVGDDGTSKEPVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNTVTRM
MRPASDQVQVKVTLNDEDMDTFVFAVGSKRAMARLQKEMHDLSEFCSDKPKSGAKYGLPD
SMAILSEMGEVTDGVMDNKMVHYITNHADKIESIHFSDQFSGPKIMQEEGQPLKLPETKK
TLLFTFNVPGYGSTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKQKADRNRARVEENF
LKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKIEKKQMKMKQ
IKVKAM
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtgcgtttttcctcctggttcccacactgttgctcctcctggctcttcctgcc
gccagaggacgttacaacgacgactttgacgacggggaggacctggcagactttgacgac
aatgacttcgcagagtttgaggacatgaatgatgatttaacagctgaggcggagacggcc
ccaccgccacgcgtctcatcaccttcctcacagactgaagacgacgaagatgaagccacc
gtggagctggaggatggtcaggatggtttcgaggactccgacacacaagacgaagatatg
tacagcaaatatgacaaggacgagtttgaggggatggagaagacgggccactctatgaag
gacccgctcataatccacacggttcctgcacacctgcagaacagctgggagagttactac
atggagatcctgatggtgacgggtttactgtgctacatcatgaactacatcataggcaag
aacaagaacagccggctcgctcaggcctggtttaactcccacagggaacttctggagagc
aactttgcacttgtgggcgatgacggcaccagtaaagaacctgtgagcactgggaagctg
aatcaggaaaacgaacacatctataatctgtggtgctctggccgtgtgtgctgtgaagga
atgctgattcaactcaagttcctgaagaggcaggacctcctgaacacagtgaccaggatg
atgaggcccgcctctgaccaagtgcaagtcaaagtgacgcttaacgacgaagacatggac
actttcgtctttgctgtgggctctaagagagccatggctcggctgcagaaggagatgcat
gacttgagcgagttctgcagcgacaagccgaagtcgggggcaaaatatgggcttccagac
tccatggcaattctcagtgagatgggggaagtaacggatggtgtgatggataacaagatg
gtacactacatcaccaaccatgctgacaagatcgagtcgatccatttctcggatcagttt
tctggtccaaaaattatgcaagaggagggtcagccgttaaagctgcctgagaccaagaag
actctactgtttacatttaatgtgcctggctacggcagcacgtctcccaaagacatggac
tctctgcttccgctcatgaacatggtgatctacagcatcgataaggtcaagaagctccgt
ctaaacagagagggaaagcagaaagcggacagaaaccgggctcgcgttgaggagaacttc
ctgaaacagacgcacgctcagcgccaggaagcagcccaaacccgcagagaggagaagaaa
agagccgagaaggagaggatcatgaacgaagaggatcctgagagacaacgccgtctggag
gaggcagcgcagcggcgtgagcagaagaagattgagaagaagcagatgaagatgaagcag
atcaaagtgaaagccatgtga
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