Xiphophorus hellerii (green swordtail): 116736045
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Entry
116736045 CDS
T07363
Symbol
itga2b
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116736045 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116736045 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116736045 (itga2b)
04810 Regulation of actin cytoskeleton
116736045 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116736045 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116736045 (itga2b)
04515 Cell adhesion molecules [BR:
xhe04515
]
116736045 (itga2b)
04090 CD molecules [BR:
xhe04090
]
116736045 (itga2b)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116736045 (itga2b)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116736045 (itga2b)
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin alpha subunits
116736045 (itga2b)
CD molecules [BR:
xhe04090
]
Proteins
116736045 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
116736045
NCBI-ProteinID:
XP_032444153
LinkDB
All DBs
Position
16:2690663..2702614
Genome browser
AA seq
1024 aa
AA seq
DB search
MCVFRCVCVLLCVTASVCLNLLEKPVMFSGPAGSFFGFSIDFHSFNNTFFVVIGAPKANT
SQPGVTEGGGVFLCTWSPDGACDIIDFDLTGDEEHSLSGLRFHSFKSGQWFGASVRSVGS
TYLLACAPLFHWNVNQKEAESGKTPVGNCLLLDQMTRSATPFSPCRGALMEDDYTQSSNR
NDQRYCEVGFSADITKDGRLVLGAPGSFYFQGQVITVGISDIINSGQSDEPIQYVAGIHQ
SNEQEGYDLYRGYSVASGLLTGDATTDYVVGVPNDRNTAGTVNIYDGRMAGSLRVRHTFL
GTQVASYFGHSVAVADINSDGLDDVLIGAPLFMDRVMGQLQERGQVLLYLQKKKSSFSSQ
PDQSLIGQSIYGRFGSALSVLGDLDMDGYQDVAVGAPWSDGGGGQVFIYLGNSNGLSATP
SQIINSPLLSSRSAFGFSLRSGVDLDGNGYPDLLVGAWGADQVFLYRSQAVIRSRVSVSL
LPDFLNPDVKLCHHKNTPVSCFAVRMCIYVSGHRIPQQTALRVEIHLDTMKQPMARRTLL
LSNNQPQTSMELVVERQVGLVCTNHTAYLRSEEEVRDKLSPIFITAEISLLNSTQNALLH
GQTHSTVQSRLILDCGDDNICIPDLKLSAKPVSDSVLIGDDQSLLLLVSATNDGEGAYET
ELVVQLPEHTHFQSCQGENRLVCVQRKENQTVVVTCDLGNPMKHRQKVQTGLLFSVGNLE
EVDNHITFSLRIRSKNSVNSSSNHVTVKVQVKAEATLEIRGGSVPPDVLLPHPDWQPVGN
PISLEEVGPLMEHVYEIRNQGPSSVNARLTVDFPSTWRHHFLLYVISTPSEESLSCQTLN
TSDVMPLELVDNSSLTVVSQPIQQEETNSIEQTVHVNCSSSETGCVRFECDVVDLGRGFS
AVVKISARLNLHTLTQTSYLNYDLVSSASYDVISAPSKVQPLLLTSGHTQAQLSVVWRPP
DGEKPVPIGYIILSIISGLLLLFLLCFIFWKLGFFRRNRPPTDDDDGGEDDGEQQLAEES
HMTE
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgttcaggtgtgtgtgtgtgctgctgtgtgtcacggcgagtgtgtgtctgaac
ctgctggaaaaaccagtgatgttcagtggaccagcaggaagtttttttggattctccatc
gacttccactccttcaacaacacgttcttcgttgtgattggagctcccaaagccaacacc
agccagcccggggtcacagagggagggggcgtgtttctgtgcacctggtcacctgatgga
gcctgtgacatcatcgattttgacctgacaggtgatgaggaacacagcctctcaggtctc
aggtttcactcctttaagagcgggcaatggtttggagcttctgttcgctcagtcggcagc
acatacctgctggcgtgtgcgccactctttcattggaacgtcaaccagaaagaggcagag
tcagggaaaacacctgtaggaaactgtctcctattggaccaaatgaccaggagcgccaca
cctttctctccctgcagaggggccttgatggaggacgactacacgcagagtagcaacaga
aacgatcagcgctactgtgaggttggcttcagcgctgacatcaccaaggacggtcggttg
gtgcttggagctccaggaagcttctacttccagggtcaggtgatcacagtgggtatcagt
gacatcatcaacagtggacagagtgatgaacccatccagtatgtggctggaatccaccag
tcaaatgagcaggaaggttacgacctttaccgaggttactcagtggccagtggtttgttg
actggagacgccacaacagattatgtggtcggggttccaaatgacaggaacacggcagga
acagtgaatatctatgacggcaggatggccggctctctgagagttcgccataccttcctg
gggactcaggtggcgtcctactttggtcacagcgtcgccgtggcggacatcaacagtgat
ggtctggacgacgtgctgatcggagcgcctctcttcatggacagagtgatggggcagctg
caggagagagggcaggtccttttatacctgcagaagaaaaagtcctccttctcctcacag
cctgaccaatcactgatcggtcagtcgatctatggccggtttggctccgccctctccgtg
ctgggtgacctggacatggatggttaccaagatgttgcagttggggctccgtggtcagat
ggaggtggtggccaggtgtttatttacctgggcaacagcaacggcctgtcggctacgccc
tcgcaaattattaacagcccattacttagcagcaggtcagcgtttggattttctctcagg
tcaggtgtggatctcgatgggaacggatatccagatctgctggttggagcgtggggtgca
gaccaagtctttctctacaggtctcaggctgtgatccggtccagagtttctgtctcactg
ctaccagacttcctgaatccagatgttaaactgtgtcatcacaaaaacacaccagtttca
tgttttgctgtccgaatgtgcatctatgtctctggtcacagaatccctcagcagacagct
ctaagggtggagatacacctggatacgatgaagcagccaatggcacgaagaactctgctg
ctgtcaaacaatcagcctcagacgtcaatggagctggttgtagagaggcaggtgggcttg
gtctgtaccaatcacacagcatacctgaggtctgaagaggaagttcgggataaactgagt
ccgatcttcatcactgctgagatcagcctcctcaattctacccagaatgctctgctgcat
ggtcagacacactcaacagtccagagccggctgattctggactgcggggatgataacatt
tgcattcctgacctgaagttgagcgctaaacctgtatcagacagcgtgttgatcggagac
gatcagtccctgttgttgttggtgtcggctacaaacgatggtgagggcgcgtatgagacc
gagctggtggtccaactccctgaacacacacacttccagagctgtcagggtgaaaaccga
ctggtgtgtgttcaaaggaaagaaaaccagacggttgttgtcacctgtgacctcgggaac
ccaatgaaacacagacagaaagtccagactggtctcctcttcagcgtcggcaacctggag
gaggtggacaatcacatcaccttcagcctaagaatacgaagtaagaactctgtgaactcc
agcagtaaccatgtgacagtgaaggttcaggtgaaggccgaggccacactagagatcaga
gggggatccgtccctccagacgtcctcttgccccatccggactggcagccagtaggcaac
cctataagtctggaggaagttgggccactgatggagcacgtgtatgagattagaaatcag
ggtcccagttctgtcaacgcccgactgaccgtggacttcccttctacctggcgacatcac
ttcctgctctacgtcatctccaccccgtcagaagaatccttgagttgtcagacactgaac
acatcagacgtgatgcctttagagctcgtagataactccagtcttactgtagtttctcag
cccatccagcaggaggagacaaactcaatcgaacaaacagtccatgtgaactgcagcagc
agtgagacggggtgtgtccggtttgagtgtgatgtcgtggatttggggcggggctttagc
gctgtggtaaaaatctcagctcggctaaatttgcacacactcacacagacctcctatctg
aactatgacctcgtttcttctgcctcttatgatgtcatcagcgcaccatcaaaggtccaa
ccactgctgcttacaagtggacacacacaggctcagctcagtgtagtgtggcgtcctcct
gatggggagaaacccgttcctattggctacatcatcctgtcaatcatctctggactcctc
ctcctcttcctcctctgcttcatcttctggaagctgggcttcttcaggcgcaacagaccc
cccactgatgatgatgatggtggtgaagacgatggagagcagcaactggctgaggagagt
cacatgactgagtaa
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integrated database retrieval system
