Xiphophorus hellerii (green swordtail): 116736060
Help
Entry
116736060 CDS
T07363
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116736060 (caskin1)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
116736060 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Caskin1-CID
SAM_2
Ank_5
Caskin-Pro-rich
Ank_3
Caskin-tail
SH3_2
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
116736060
NCBI-ProteinID:
XP_032444167
LinkDB
All DBs
Position
16:complement(22671469..22776454)
Genome browser
AA seq
1630 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSTKKVNVNFQDIDGFSPLHHAALNG
NLELVSLLLESQAAVDIRDQKGMRPLHYAAWLGKAEPMKMLLKSGSSVNGQSDEGQIPLH
LSAQHGHYEVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTADPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEVVRLL
LESGINAAVRNTYSQTALDIVYQFTATQASREIKQLLRDASAALQVRALKDYCNNYDLTS
LNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTLVEVISKRTGLASTVICTQQ
FQKIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYNRSPV
TTPQGDTPTAPGCRGSEASPQSSPTPSSGPHGGSNEEIWVLRKPVAGGDRSSVGSSGSVT
SVRSSGSGQSATNAAHILHAQAEGVKLLATVLSQSTKAKEHLMEQSKSVDQPAGSAGSSR
TSSQSGCPLHEAPPYDATATRKGEVPCEGKSSEAVVQWLSDFQLQVYAPNFLGAGYDLPT
ISRMTPEDLTAIGITKPGHRKKITSEINKLSVTEWLPEQKPSNLGEWLSAIGLSQYHQVL
VQNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVKRLAEMQRSSDGRGSLRKKPPPI
TQQQEVISMDSPPPDEVIMSPKMSTFQDSELSSELQNAIIHPGQEVRVQRTRTLSKDHDD
VITGGGGPPKKEARTVRQQSSQGSSSSHRGSVSSQGKHRHSHNQPAPPYTPPHTPTKTRT
SSSSSTSSIQSSASPQSKTKPSPQAIQGEQPSLHSHQPQSPTHRGAPCQIPQQQQQQQQQ
PQPQVQQHQPHPHHHHPQTQVMEVRESPQQQVPHLCLPPEAELEEAEGAEPLALKKKRAH
SLNRYAVSDGECDERVGGEDGGGGGGEMETEVAVVQTSATARAEGVKYATVTHRVSRSHS
VRNQEKTAGRSHTQSFALRQKKKGPPPPPPKRSSSAISSSNSNLTEANTQQQTHTTTGGM
LDVPYHQQRRASDLGVSVETAAVETNSMGSVRSIAAMLEMSSIGGGAKGMALQKNYLQVG
KTREAIGLDGEVVNRRRTISGPVSELVEAARREQPTPLDFAPSSSQPQPQSPPPLVNSSS
PHPPSSPVPCSGGSGSSSENLPFAEEGSLTIRRQARGEGEGQCVFCVCLQGDGDTPPGDG
GFTLEDTPEATGTLKRRPRISKSHPNGSDFTLQESSTVKRRPKSRDKEPEGFGEMAAANG
EVVGTGHPNTTQPMPYQNGMATVKRRLPSEAGVTEQPQPQQQVIPTPRRDSTDQGAPAVN
EGVPMRKPKPPVSPKPVVAQIKRQGGPQSSPQAALNKRVPLPGPGTPGSPVEGKKIPPPV
SPKPAPPPTAPKPAKLIHSMTSPASPTSVSTQVKQHSVVARQTSSPTSFLLCNISNPPVA
KPTSPSSQSPHTPQTPTTPQTPQTPATPSPTPPPVKPPRSSIGGVSVDSGITGGAVTPQA
STTTDFGVDSLVQQKLEETSASLAAALQAVEDKILRQDDSVAEQKTTVSILDDIGSMFDD
LADQLDAMLE
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggaactgctgcaggcggtgaagaccgaggaccttctcaccgtgcag
aagctgctacagaggcctcgaccggggaaagcaaagctcctcggctccacgaagaaggtg
aacgtgaactttcaggatatcgatgggttttctcccctgcatcatgcggctcttaacggg
aacctggagctggtctctctgctgttggagtcgcaggccgctgtcgacatcagagaccag
aaaggaatgcggccgctgcattatgccgcctggctcgggaaggccgagccaatgaagatg
ctgctgaagtcgggttcatctgtcaacggccaatcagatgagggccagatacctctgcac
ctatcagcacaacatggccactatgaggtgtctgagatgctgctgcagcaccagtccaac
ccgtgcatcgtggataatgcagggaaaacccctctggatttggcgtgtgaattcggcagg
gtcggggtggtccagttgttgctgtctagcaacatgtgtgccgctctgttggaacccaaa
aagggagacactgcagaccccaacgggacgtctccgctccacctggctgccaaaaacgga
catatagacatcatcaggttgctgattcaggcgggcatcgacatcaacaggcagaccaaa
gccggcactgcccttcacgaagcagccctgtgtggcaagacggaggtggtgagactcctg
ctggagagtgggatcaacgcagctgttagaaacacctacagccagactgcgcttgacatc
gtttaccagttcacagcaacgcaagccagcagggagataaagcagctgctgagggatgcg
tcagcagccctgcaggtccgggctctgaaggattactgcaacaactacgacctgaccagc
ctcaacatcaaagctggagacgtcatcacggtattggagcaacatcctgatggacgttgg
aaaggctgtatccatgacaaccggacgggaaacgatcgagtggggtacttcccatccact
ctggttgaggtcatcagcaagcgcacaggtttggccagcacagtcatttgtactcaacaa
tttcaaaagataccgctggttcccccggcgacggttgcccctgccaacgcggtagtcaac
ggcaacgacaccacgttccatcagatccatatcctgcctccaccgcctcctcctccacca
cattcccatcagccactgcttccacttttcacttcctttgggtataacaggtcgcccgtg
acaaccccacagggagacacacccactgccccaggttgtcgaggctcagaggcaagtcct
caaagttctcccactccatccagcgggccccatggaggctccaacgaagagatctgggtt
ctgcgcaagcccgtggcaggtggagatcgcagcagcgtggggagttctgggagcgtgacc
agtgtgaggtcttcaggtagcggtcagagcgccaccaacgccgcgcacatcctccacgcg
caggccgagggcgtgaagcttttagccactgtcttgtcccagtctacaaaagccaaggag
catctgatggagcagtccaagtcggtggaccaacctgcaggctctgccggctcctctcgg
acgtccagccaatcgggctgtccgcttcacgaagcgccgccttacgatgccacggcaacc
aggaagggggaggttccatgcgaagggaagagctcagaggccgttgtccaatggctgagc
gactttcagctgcaggtctacgctccaaacttcctgggcgctggctatgacctgcccacc
attagccgaatgactccggaggatctgacagctatcggaataaccaaacctggtcacaga
aagaagatcacatcagagatcaacaagctgagcgtcacagagtggctgccagagcagaaa
cctagcaacctgggggaatggttgtcggccataggtctgagccagtaccaccaggtgttg
gtgcagaacggctacgaaaacatcgacttcatcacagacatcacctgggaagatctgcag
gaaataggcatcaccaagctgggtcaccagaagaagctgatgctggccgtgaagcggttg
gctgaaatgcagcgcagctcagatgggcggggctcccttcgaaagaaaccgccacccatc
acacagcagcaggaagtcatctccatggacagcccgcctccagatgaggtcatcatgtct
ccaaagatgagtaccttccaggacagtgagttgagctcagagcttcagaatgccatcatt
cacccaggtcaagaggtcagagttcagcgaactcgcaccctaagcaaggaccatgacgac
gtgataactggaggtggagggccaccgaagaaggaggcacggacagtgaggcagcaaagc
agccagggaagctcctcgtcccacagaggcagcgtttcatcgcaaggaaaacaccgtcat
tctcacaaccagccagcacctccctacacaccaccacacacacccaccaaaaccaggact
tcgtcctcctcttccacctcctccattcagagcagtgcttccccacagagtaagaccaaa
ccatcaccccaggcaatacaaggggagcaaccttcgctgcactcacaccaacctcagtct
ccaacccaccgtggagccccgtgtcaaatcccccagcagcagcagcagcagcagcagcag
ccgcagcctcaagttcagcagcatcagccccatcctcatcaccaccacccacagacacag
gtgatggaggtcagagaaagcccacagcagcaagttccacacctctgtctaccacccgaa
gctgaactggaagaggctgagggagcagaacctttggccctcaagaagaaacgtgcccac
agtctcaaccgatacgccgtctcagacggggagtgtgatgagagagtaggaggtgaagat
ggaggaggcggaggaggagaaatggaaacagaagtagcagtagttcagacctctgcgact
gcaagagcggaaggagtgaaatacgctacagtgacccaccgcgtgagccgcagccattca
gtccgcaaccaggaaaagactgccggccgcagtcacacccaatccttcgctttgcgtcag
aagaagaagggtcctccaccgcccccgcccaaacgctcaagctctgccatctccagctcc
aactccaacttgacggaggcaaacacacagcagcagacacataccaccactgggggaatg
ctggatgtgccttaccaccaacagcggagggccagcgacctgggggtgtccgtggagacg
gctgcagtggagaccaacagcatgggcagtgtgaggagcatcgctgccatgttagagatg
tcttccatagggggtggggccaaaggcatggcactgcaaaagaattacctgcaggtggga
aaaacccgcgaggccattggcctggacggtgaagtggtgaaccggcggcgaaccataagt
ggacccgtaagcgagctggtggaggctgccaggcgggaacaaccgactccactggatttc
gccccatcctcctcccaacctcaacctcaatccccccctccccttgtgaactcctcttca
cctcaccctccatcttccccggttccctgctcaggaggcagtggtagctcctcggagaac
cttccattcgcagaagagggaagcctcaccatccgccgccaagctcgaggagaaggagaa
ggacagtgtgtattttgtgtttgtctgcagggtgacggcgacacccccccgggagacggg
ggcttcaccttggaggacacccctgaagccacgggaaccttaaagcgacggcctcgcatt
tccaagtcccaccccaacggttcggatttcaccctccaggagtcatccaccgtaaaacgg
cggcccaagagccgtgacaaggaacccgaaggcttcggagaaatggccgctgccaatggg
gaggtggttggcaccgggcatcccaacactacacagccaatgccgtaccagaatggcatg
gccactgtaaaacgccgcctgccgtctgaagctggagtgaccgaacagccgcaacctcag
caacaagtgatcccaaccccccgcagagacagcacggaccagggagctcctgcagtaaat
gaaggagtccctatgaggaaaccaaagcctccggtctccccaaaacccgtcgttgcacag
ataaagagacaaggaggcccacagagctcaccacaggctgccctcaataaaagagtcccc
ctgccagggccagggacccctggaagtccagtggaaggaaagaagatccctccaccggtc
tcaccgaaaccagcacccccacctacggcaccaaaaccggccaagctgatccactctatg
acaagtcccgcctccccgacctcagtttccacccaggtcaagcagcactctgtggtggca
cggcagaccagttcacctacttccttcctgctgtgcaacatctccaaccctcctgttgcc
aagccgacaagcccttcttctcaaagcccccacacaccgcagacccccacaacccctcag
acacctcagacccctgctactcccagcccaaccccgccgcccgtaaagcccccccgctcc
tccatcgggggcgtgtcagtggacagtgggattacaggaggagctgtcacaccacaggcc
tccacaacaacagactttggtgtagactctttggtgcaacagaagctggaagagacgagc
gcatccctggctgctgctctgcaggctgtggaagataagattctacggcaggacgactct
gtggctgagcagaagacaacagtgagcatcctcgatgacatcggcagcatgttcgacgac
ttggccgaccagctggatgccatgttggagtaa
DBGET
integrated database retrieval system
