Xiphophorus hellerii (green swordtail): 116736091
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Entry
116736091 CDS
T07363
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116736091 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xhe01007
]
116736091 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116736091 (farsa)
Enzymes [BR:
xhe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116736091 (farsa)
Amino acid related enzymes [BR:
xhe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116736091 (farsa)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116736091 (farsa)
Prokaryotic type
116736091 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
DUF5953
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
116736091
NCBI-ProteinID:
XP_032444222
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All DBs
Position
16:21816818..21824703
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AA seq
497 aa
AA seq
DB search
MADTGVVETLLQRIEKVDGGADSLEVAASLGVDHQVIVGAVKSLQALGDVISAELRSSKH
WELTEEGTEIAEQGSHEARVFNSIPLEGLPQAELMKLSFGKIGFSKAMSNKWIRVDKSHD
GGPRIFRTAESIQDQVREKLLLAKQGDAARLDEKEKNELKKRKLLAEVTVKSYWITKGNS
FSATVTKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFSEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPSLAHGFPMDYLERVKKVH
SEGGYGSQGYKYDWKMEEAQKNILRTHTTAVSARMLYKLAQQEKFRPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADKDLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRDLVGH
KVDLQMVYDSPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtggtggaaacgcttcttcagcggattgagaaggtggacggcggc
gcggacagcctggaagtggcagccagcctcggggtggaccaccaggttatcgtcggagct
gtgaagagtctgcaggcgcttggcgacgttatctcagcggagctgcgctcctccaaacac
tgggaactgaccgaggaggggacggagatagccgagcagggcagccatgaagcccgggtc
ttcaactccatccctctggagggcctgccacaggctgagctcatgaaactctccttcggg
aagatcggcttcagcaaggccatgtccaacaagtggatccgcgtggacaagtcccacgac
ggaggccccaggatattcagaaccgcggagagcatacaggaccaggtcagagagaagctg
ctgctggccaaacagggcgacgccgcgcgcctcgacgagaaggagaagaacgagctgaag
aagagaaaactcctcgctgaagtcactgttaagtcttactggatcacaaagggaaactcc
ttcagcgccacggtaaccaaacaggagacggagctgactcctgagatgattgccagtggc
agctggaaagagaagaagtttaagccgtacaacttcgaggcgatgggcgtggcccccgac
tgcggacacctccaccctctgatgaaggtgcggacgcagttcaggcagatcttcctggag
atgggtttctccgagatgccgaccaacaacttcatcgagagctccttctggaatttcgac
tctctgttccagcctcagcagcacccggccagagaccagcacgacaccttcttcctgtcc
gacccgtcactcgctcacggcttccccatggactacctggagagagtgaagaaggtccac
tcggagggcggctacggctcgcaggggtacaaatacgactggaagatggaggaggctcag
aagaacatcctccgaacacacactacagctgttagcgcgcgcatgctgtataagctagca
cagcaggaaaagttcaggcctgtcaagtatttctccatcgaccgggtgttcaggaacgag
acgctggacgccacccacctggcggagtttcaccagatagagggggtggtggccgacaaa
gacctcacgctgggggacctgatgggggtgctgcaccagttcttcaccaaactaggaata
accaaactgcgcttcaagccggcttacaacccctacacagagcccagtatggaagtgttc
agctaccatgaagggctgaaaaagtgggtggaagtgggaaactctggggtgttcaggcca
gagatgctgctgcccatgggcctcccagaggacgtgtcggtgatagcctggggtctgtct
ctggagaggcccaccatgatcaaatacggcatcaacaacatcagagacctggtgggacac
aaggtggacctgcagatggtctacgacagccccatatgtcgactggactcctga
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