Xiphophorus hellerii (green swordtail): 116736101
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Entry
116736101 CDS
T07363
Name
(RefSeq) neuronal cell adhesion molecule-like isoform X1
KO
K06756
neuronal cell adhesion molecule
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116736101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116736101
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
L1 family
116736101
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
116736101
NCBI-ProteinID:
XP_032444241
LinkDB
All DBs
Position
2:22240476..22337157
Genome browser
AA seq
1335 aa
AA seq
DB search
MMEMRSLEAALLVLILGHLVSALEVPLDLLPGLAQPPTITHQSPKDYIVDPRENIIIHCE
AKGKPHPSFSWTRNGTHFDIEQDESVTMRPHSGTLVVDISRARPEHYEGVFQCTARNKHG
SAVSNNIVVRQSKSPLWSKEKNKPIVVQEGVSLVLPCRPPAGLPPPIIFWMDNNFQKLPQ
GKRVSQSLNGDLYFSNIRREDSRNDYICYARFTHTQTIQQKQPITVKVLNLDAINETLAE
YYNDTELLNEAPVDDRKPTFLIPSGHSSYKMVLRGHVLEMECIAEGLPTPEVSWTKVSRD
LPSRRTSFLHFNKTLRIVNVSESDEGDYSCTAKNQLGSAHHIITVEVKAAPYWISGPPKN
LVLAPGENGALTCRASGTPKPSIIWSMNGDRIENLPTDISRKVEDDTIIFTDVQVGSSAV
YQCNISNPYGYLLSNAFVNVLHESPRVLTPANKIYQVIENRPALMDCSSFGSPIPKIEWF
KDSRASTLNGDPYILHDNGTLEIQVAQSQHKGKYTCIARNSLGASENHVYLHIKEPTRIL
KQPVDTVVQRGRSVTFECTIKHDKDLLPTLIWLKDDEELPDDERFIVESNSLSTSDVSER
EWLRDHGELPNDDRFIVEFNSLYITDVSERDAGVYTCYVNTTLDQDSVTAELTVVETTPA
PAVIHGRPDPPTDLELTDQKKRSIQLTWIPGEEHNSPIQEFVIQYEDSLHHQGHWHDIAR
VPGTKTTAHLKLSPYVHYTFRVLARNAVGLSEPSSTSRMYKTEPAAPDQNPKNVRGSGNK
HNNLVITWEPLSGLQSNGPGLYYKVSWRQKRPGSDWITATTNNSMYTVSEIPTFSPFEIK
VQAVNNHGDGPDPAVAIGYSGEDLPAAAPANVQAVVLNSTLARVRWDPVPPHLIRGQIQG
YKVHYSRTHSLHKHNPHHTEKRMLTFSGNHSQGLLPGLHPFSHYSFYVSVFNKKGEGPKS
EKQEFKTPEGEPGPPASLSVTNPSLDSLTLEWSPPHEHNGHITGYNLKYQPVNNSNELGP
EEELALASNETSVTLQNLKYSPRYKFYLNARTSVGAGPAISQEAVVKQDEGGTQTSHPVA
GFPSRRPIHKARPVSLFANVSSSVEEDGALITWEYWGPEKNVYVEYIAENSEGEEEWQKE
LVNGSQNVKLKGLKVGLSYRVRVVAKGHHEQPLQSEELFVTVPAVTSRQVDIATQGWFIG
LMCAIALLILILLIICFIQRNKGGKYPVKEKEDAHTDPEFQPMKDDDCTFVEYSDNEDHK
LVKESRTPSNGTVKRDDSDDSLVDYGEGGDGQFNEDGSFIGQYSGKSSSRDNAEGPESSG
APSPINAMNSLNSFV
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatgaggagtttggaagcagcgctgctggtgttgatcctgggacacctcgtc
tctgctctggaggtcccattagaccttcttccaggattggcacagcctccaacaataact
caccagtccccaaaggactacatcgtggatcctcgagagaatattataattcactgtgag
gcgaaggggaagccgcatcccagcttctcctggacgagaaatgggacccactttgacatt
gaacaggacgaaagtgtcaccatgaggcctcactcagggactctggtggtggacatcagc
agagcaagacccgaacattatgagggagtgtttcagtgcacggcgaggaacaaacacgga
tctgctgtgtccaacaacatcgtcgtcagacagtcaaagtcccccttgtggtcaaaggag
aaaaacaaaccaatcgtggttcaggagggtgtctccttggtgctgccatgccgacctcca
gcaggacttccacctcccatcatattctggatggacaataacttccagaagttacctcag
ggcaagagggtgtcccagtccttgaatggcgacctgtacttctccaacattcgccgagag
gattccaggaacgactacatctgctacgctcgcttcacacacacacaaaccatccagcag
aaacagcccatcactgtcaaagtgctcaacctggatgcaatcaatgaaacactggcagaa
tattataatgacactgaattgttaaatgaggccccagtggatgataggaaaccaaccttc
ctcatcccatctggccactcaagctacaagatggtgctgaggggacacgtactggagatg
gagtgcattgccgaaggactgcccacccctgaggtatcctggaccaaagtgagcagagac
ctacccagcaggcgcacgtccttccttcacttcaacaagaccctgcggattgtgaacgtg
tctgaatcggatgagggagattacagttgcacagccaagaaccagctcggctctgcgcac
cacatcatcactgtcgaggtcaaagctgccccttattggatcagtggacctccaaagaat
cttgttctggctccaggagagaatggagcgctgacctgcagggccagcggcacacccaaa
ccctccatcatatggtcaatgaatggtgaccgcatagagaatttacctacagatatcagc
agaaaagtggaggacgacacgatcatcttcactgacgttcaggttggatccagcgctgtg
taccagtgcaacatctcaaacccatatggttacctcctctccaacgctttcgtcaacgtc
ctccatgagtcacccagagtgctgacgccagccaacaagatctaccaggtcatcgaaaat
cgcccagccctcatggactgctcctcttttgggtcacccattcccaaaattgagtggttt
aaagacagcagagccagcaccctgaatggagacccttacatcctgcatgacaatggtact
ttggagattcaagtagctcagtcgcagcacaaaggcaaatacacctgcattgccaggaac
tcgctcggagcctctgagaaccatgtttacctgcatataaaagagcctacccgtatccta
aagcaaccggttgacacggtggtccaaagaggccgatctgtgacgttcgagtgtacaata
aaacacgacaaggatctcttacccactttgatttggcttaaagatgatgaagagcttcct
gacgatgagcgattcattgtagagtccaacagcctgtctacttctgatgtgtcagagaga
gaatggctcagagatcatggggagctgccaaacgatgatcgattcatcgtagaattcaac
agcctgtacatcactgatgtgtcggagagagatgcaggggtgtacacatgctacgtaaac
accactctggaccaagactcggtcaccgctgagctgactgttgtcgagaccacaccagct
ccggctgtcatccacgggcgacccgatccccccacagacctggagttgacagaccagaaa
aagaggagcattcagcttacttggatccctggggaggaacataacagccctattcaggaa
tttgtaatccagtatgaagactcgctgcaccaccaaggtcactggcatgacattgcacgg
gttcccgggaccaagacaacggctcacctcaagctttcaccatatgtccactacacattc
agagtgttggcccgtaacgctgtgggtctgagcgagcctagcagcacatctcgaatgtat
aaaactgagcctgcagctcctgaccagaacccaaaaaatgtacgtggatctggaaataaa
cataacaatcttgttatcacctgggagcctctatcaggccttcagtccaacggtcctggg
ctttattataaagtgagttggaggcagaagaggccaggcagcgactggataacagccact
accaacaactccatgtatactgtatctgaaatacccacatttagtccatttgagataaag
gttcaggctgtaaacaaccacggagatggaccagaccccgctgttgctatcggctactca
ggagaagatttgccagcagcagctccagcaaatgttcaggctgtagtgctaaacagcacc
ttggctcgggtacgctgggaccctgtgcctcctcatttaatacgagggcagatccaagga
tacaaggttcattactcgaggacacacagccttcataaacacaacccccatcacacagag
aagcgcatgctcacctttagtgggaaccacagccaaggcctgctgcccgggttgcaccca
ttcagccactattctttctatgtaagcgtcttcaataagaaaggagagggtcccaaaagt
gaaaagcaggagtttaagacacctgaaggagagcctgggccacccgcctcgctgtctgtc
acaaacccaagcctagattctctaaccctcgaatggagtcctcctcatgaacataatggg
cacatcactggctacaaccttaaatatcagccagtcaataactccaatgaacttggccca
gaagaggaactggccctggcttccaatgagacctcagtcactttgcaaaacctcaagtac
agcccacgctacaagttttatttgaatgcgagaacaagcgttggagcgggcccagccatt
tctcaggaagctgtcgtcaagcaggatgaaggaggcacccaaacctctcatcccgttgca
gggtttccttcacgccgtccgatccacaaggcccggcctgtgagtctttttgcgaatgtt
agctcctcggttgaagaagatggtgccctgatcacttgggagtactggggcccagagaaa
aatgtttatgtagagtacattgcagaaaacagtgaaggtgaagaggagtggcaaaaagag
cttgtgaacggctctcagaacgttaagctgaaaggtctaaaggtgggcctctcctatagg
gtgcgtgtagtggccaagggtcaccacgagcagccgctccagtccgaggagctgtttgtc
acggtcccagctgtgacgagcagacaggtagacatcgccactcagggatggttcattggc
ctcatgtgcgccatcgccctgctcatcctgattcttctcattatctgcttcattcagagg
aataaaggaggaaaataccccgtcaaagaaaaggaggatgcacacacagacccggagttc
cagccaatgaaagatgatgactgtacttttgtggaatacagtgacaatgaggaccataaa
ctggtaaaagagagccgcacgccgtctaacgggacggttaagagagacgacagtgacgac
agcttagttgactacggggaaggaggagacggacagttcaacgaggacggctcctttatt
ggccagtatagtggaaagagttccagcagggacaatgccgagggccctgagagctcaggg
gccccatccccgattaacgccatgaactccttgaactcttttgtgtag
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