Xiphophorus hellerii (green swordtail): 116736239
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Entry
116736239 CDS
T07363
Symbol
socs1
Name
(RefSeq) suppressor of cytokine signaling 1
KO
K04694
suppressor of cytokine signaling 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116736239 (socs1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116736239 (socs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116736239 (socs1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
116736239 (socs1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2
SOCS_box
SH2_1
Rubella_E2
Motif
Other DBs
NCBI-GeneID:
116736239
NCBI-ProteinID:
XP_032444488
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All DBs
Position
16:complement(17719091..17721233)
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AA seq
221 aa
AA seq
DB search
MVADSTVEGHERTALPSASPAPSSSVTSSSSAAAAATPTQSEQLQRQAGPNPSLKSASAR
SVYPTHFPTFASKEDCNVITDTAAKLERSGFYWGPLGVEEAHRMLRSAPLGSYLIRDSRQ
KDVFFTLSYHDRKGPVSVRIDYKQQKFSLAGNQRSFPTLFALLEYYMNTPKRSLKVPYRK
WEPTLQELCRRRIVELCGGKIPELPVTHVVQDFLLDFPYKL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgacagcacagtggaaggccatgagcggaccgccttgccaagcgcttcacca
gcaccatcttcttctgtaacttcatcatcatcagcagcagcagcagcaacccctacacaa
tcggagcagcttcagcgtcaggccggaccaaatccaagcctgaagtccgcgtccgcccgc
tctgtgtacccaactcatttcccgacgttcgcctccaaggaggactgcaacgtcatcact
gacacagccgccaagcttgagcgcagcggcttctactggggcccgttgggagtggaggag
gcccaccgcatgctccgcagcgccccgctgggcagctaccttatccgcgacagccggcag
aaggacgtctttttcaccctgtcctatcacgacaggaaaggacccgtcagtgtgcgcatc
gactacaagcagcagaagttctctctggccggcaaccagcgctccttcccaacgctcttt
gccctcttggagtattacatgaacacacccaagaggagcctgaaggtcccgtacaggaaa
tgggagcccacgctgcaggagctgtgcaggagacgcatcgtagagttgtgcggaggaaag
atcccggagctgccggtcacacatgtggtccaagatttcctgctggacttcccttacaaa
ctgtaa
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