Xiphophorus hellerii (green swordtail): 116736413
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Entry
116736413 CDS
T07363
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116736413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116736413
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
NGL family
116736413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
LRRNT
LRR_9
V-set
Ig_2
Insulin_TMD
DMRT5_DMB
Sp38
Ig_6
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
116736413
NCBI-ProteinID:
XP_032444733
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All DBs
Position
17:complement(6234400..6239540)
Genome browser
AA seq
957 aa
AA seq
DB search
MCHIMSLLGRVAAQRARKAALLCIVFLMARAWSSASLASAGAAVSLGPQGCPPQCSCSNQ
QGKVVCTRRGLTRVPPGIPANTRHLNLMENAIEAVQADSFRHLHHLEVLQLGRNAIRQIE
VGAFNGLTSLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMR
LDLGELRKLEYISEGAFEGLQNLKYLNLGMCNIRGDMPNLSPLKGLEELEISENLFPVIK
PGSFRGLRSLKKLWVMNSQITVIERNAFDGLSSLVELNLAHNNLSAVPHDLFPPLKYLVE
LHLHHNPWNCGCEAVWLAQWLREYIPTNSTCCGRCHSPAIMRGRQLVDVDRGEGAAIQCS
APFIADAPRDLNISAGRVAELRCRTAPMSSVRWLLPNGTILTHASGHPRISILNDGTLNF
SNVLASDTGTYTCMVSNAAGNSNASAYLNVSAAELNTSNLSYFTTVTVEVLGPTTEMPKP
KTTTTTAAVGVGVAGGGGAGLGTTTTTASPSVFQPVFISTPTVLLQNTDSAANAVKTSAL
PGLRGANGKPGKSGPSLDEVMKTTKIIIGCFVAVTLLAAVMLIAFYKLRKRHQQRSTVAA
ARTVEIIQVDEEDLPPPASAAQESSLTLPEIRDHNSIHKLDFISHKADYSFHKPKAEYKP
QPDFTLHTPKAEYTTYKPNMDFSSHKTIADYNMHKSTPDFSLHRTKPDCSPFRQDYGAHK
TKSEYSPFKPDFGTHPKVKTDYSPFKADYSTHPRQRSDFSPFKRDYSTQPKPKHDYSPLK
SDYNMQNKSKVEYSPFKHDFGTHPRSKPDYSPFKPDYSTQPKPKMDYNSQRPKTDITYKT
KEHYTPHKTAPDYNAFKSDFSPHKVDYSAFKSDFSPHNQRPKLDCSPHKMDYSPHKVDYS
TLKAKYNTYKPSGQGAKWTDNNVGNSLPRTLPSAITAMAEPYVIKTHTKEKVQETQI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacatcatgagtctcctggggcgggtagctgcgcaacgtgccaggaaagccgcc
ctgctctgtatagtcttcctgatggcgcgagcgtggagcagcgcctccctggcctcggcg
ggggcggcggtctctttaggaccccagggctgtccaccccagtgttcctgcagtaatcag
caggggaaagtggtgtgcacacggcggggcctgacacgcgtgccccctggaattcctgcc
aacacgcgacacctcaatctaatggaaaacgccattgaggcggtgcaggctgactcgttc
cgccatctgcaccaccttgaggtgctccagcttgggcgaaatgccatacggcagattgag
gtgggcgcgtttaatggactgaccagcctcaacacattggagctgtttgacaaccggttg
acagtggtgccaagtggagccttcgagtacctgtctaaactaagagaactatggctacga
aacaacccaattgagagtattccctcctacgccttcaaccgggtaccctcactcatgcga
ctggacctgggagagttaaggaaactggagtacatctcagaaggagcttttgaggggcta
caaaacctcaagtacctgaacctgggaatgtgcaacataaggggtgatatgccaaacctc
agtcccctaaagggcttggaggagctggagatttcagaaaatctgtttccagtgataaaa
ccaggttccttcagaggtctgcgctccctcaaaaagctatgggtgatgaactcacaaatc
actgtaatagagcgcaatgcttttgatggcctgtcttcactggtggaactaaatctggcc
cataataatctaagtgctgtgccacacgacctgtttcccccgctcaagtacctggtggaa
cttcacctccaccataatccttggaactgtggctgtgaggctgtgtggttggcacagtgg
ctaagagagtacatcccaactaactcaacttgctgcggacgctgtcactcaccggccatc
atgagaggacgacagttagttgatgtagacagaggtgaaggggctgcaatccagtgttct
gcaccattcattgctgatgccccacgggacttaaacatctcagcaggaagagtggctgaa
cttcgttgcagaacagcccccatgtcttcagtgcgctggcttctacctaatgggactatc
ctgacacatgcctctggacacccgagaatatcaatcctcaatgatggtacccttaatttc
tcaaatgtccttgcatcagacactggcacttatacctgtatggtatctaatgcagctggg
aactccaatgcatcagcatacctcaatgtgagtgcagcagagctaaacacatcgaacttg
agttactttacaacagtgactgtggaggtacttggtccaaccaccgagatgcccaaaccc
aaaactactacaactacagctgctgtgggtgttggagttgctggaggaggaggagcaggc
ctcgggacaacaactacaactgcatctccttcagtctttcagccagtcttcatctcaaca
ccaacagtgctgttgcaaaatactgacagtgcagcaaatgcagttaaaacatctgcgtta
ccaggactgagaggtgccaatggcaaaccaggcaagtctgggcctagcctggatgaagtg
atgaagaccactaaaatcataataggttgctttgtggcagtgacactgctggctgctgtc
atgctaattgccttttataaattgagaaagcgccaccagcagagaagcacagtggcagct
gcccgtacagttgagattatccaggtggatgaggaggaccttccaccaccagcatctgca
gctcaagagtcatcactcacgttgcctgaaatccgagaccacaacagcatacacaagttg
gattttatcagccacaaggcagactatagctttcataaacccaaggctgaatataaaccc
caaccggattttactctacacactcccaaagctgaatatacaacatacaagccaaacatg
gacttcagcagccacaaaaccattgcagattacaacatgcacaaatcaacaccagatttc
agccttcacagaacaaagccagactgcagcccatttagacaggactacggcgctcacaaa
actaaatcggaatacagcccatttaaacctgattttggcactcacccaaaagttaaaaca
gattacagcccattcaaagcagattacagcactcatccaaggcaaagatcggactttagc
ccattcaaacgagactacagcacccaaccaaaacccaaacatgactatagtcccttaaaa
tctgactacaacatgcaaaataagtctaaagtggaatacagtccatttaagcatgacttt
ggtacccacccaaggtccaaacctgattatagcccattcaaacctgattatagcactcag
cctaaacccaaaatggactacaattcacagagaccaaaaacggacattacctacaaaaca
aaagaacattataccccccacaagactgcacctgattacaacgccttcaagtccgatttc
agtccccacaaagtggattacagcgccttcaagtctgacttcagtcctcacaatcagaga
cctaaacttgattgtagtcctcataaaatggactacagcccccataaggtggactacagc
actctaaaggccaaatacaacacctataaaccatctggtcaaggggctaaatggacagac
aataatgttgggaactctttgcctcgaaccctacctagcgccatcacagcaatggctgag
ccctatgtcataaaaactcataccaaggagaaagtacaggagactcagatttaa
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