Xiphophorus hellerii (green swordtail): 116736424
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Entry
116736424 CDS
T07363
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116736424 (rint1)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
116736424 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
116736424
NCBI-ProteinID:
XP_032444750
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All DBs
Position
17:complement(19694510..19708024)
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AA seq
789 aa
AA seq
DB search
MAAVTEEQQNSPMRKSSDQLKEKVSHRNGGVPGDLGEQEDYGLSGVMEKEQSDILKSSRN
VCELLEKIREETEALEKQVVNVCSSGPPKVAAALSAAVEVRCSLDELLQREQRISNRLQQ
HLQGTKQWMEDLGQTCNHVDFIERSMKYLKCLHHIEELSAAVQQSLMINSVWDAIKGVEN
MAALDCGLNQSQCSHLCDFLWKTLCFWHNIIKDRLTSDFEKVLAQLQWPIITPNQSVTTP
ANYQELSSQLEGLLLQLLALQTSDDLISQRVSASTQGAPPGSSSTLSPAAPSLCLPIQIM
LQPLSKRFRYHFYGNRQTNSIHKPEWYLTQVLKWMENSATFMEEKIQPVFDRSGQTVSAK
VVLCQGLVCLVQEKVASDASRMLYDDGLFCHLVEEVLQFEKDLRSHHSYPAMLPALLHIL
LDDAFLQKWLAVERKMAVEKMDAMLSAEGAWTSQYKDISDMDELKAPECAETFMTLLQVI
TERYRALPSPAAQLRFFGLQKELVDDFRIRLTQVMKEESRCPLGVRYCAILNAVNYISTI
LRDWGDNVFFLQLQQAAVSLGQQEVLGSLEMTEVGRLASLEGSLFDGLLSLLDRLKGDML
GRMLHFLMRDTAEKAQPYCQERWLSIPPPQDQSAMSLSSSACPMMLCVRDRLLNLHQVLS
VSLFQLAWQGLAEKLDNFIYQEVILSNHFSDGGAAQLQFDMTRNLFPLFGHYCRRPENFF
KHVKEACIILCLKVGSAILLKDLLKRSEQEATDFEDPSPESALNELGVFCLAPCDVLILL
NLKALLPGI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagttacagaggagcaacagaactccccaatgagaaaaagtagcgaccagtta
aaagagaaggtttctcataggaatggaggagttcctggtgatttgggggagcaggaggac
tacggactttctggagtcatggagaaggagcagagcgacatcctgaaatcctctaggaat
gtttgtgagctgctggaaaagatccgagaggagaccgaagctttggagaagcaggttgtg
aatgtttgcagttctggtcctcctaaagttgcagcagctctttctgctgcagtggaggtc
agatgttctctggacgagctgctgcagagagagcagcgcatctccaacaggctgcagcag
cacctacaggggaccaagcagtggatggaggatctgggccagacatgtaaccatgtggac
ttcatagagagatccatgaaatacctgaagtgtcttcaccacatagaggagcttagtgct
gcagtccagcagtctctgatgatcaacagtgtgtgggacgccataaagggagtagagaac
atggcagccctggactgtggtctaaaccaatcccaatgttcccatctttgtgactttctc
tggaaaactctttgtttctggcataacatcatcaaggatcgactgaccagtgattttgag
aaagtgttggctcagctgcagtggcccatcatcacacctaaccagtcagtgacgacgcct
gctaactaccaggagctgagcagccagctggagggactgctgttgcagctgctggctctg
cagacctccgatgacctcatatctcagagggtttcagcctccactcaaggagcgccgcct
ggctcttcatccaccctgtcccccgcagcaccgtccctctgtcttcccattcagatcatg
ctgcagccgctcagcaagaggttcagataccacttctatggaaatcgccaaaccaactcc
atacacaagccagagtggtacctcactcaggtcctgaaatggatggagaacagcgccacc
ttcatggaggaaaagattcagccagtctttgaccggtccggacaaaccgtcagtgccaag
gtggtgctgtgtcaaggcctggtgtgtttagtccaggagaaggtagccagtgatgcctct
cgaatgctgtatgatgatgggctcttctgccacctagtggaggaggtgctgcagtttgag
aaggacctgagaagccatcattcctacccggcaatgctgcccgctctgctccacatcctg
cttgatgacgccttccttcagaagtggctcgccgtggagaggaagatggctgtggagaag
atggacgctatgctgtcagctgagggagcctggacatctcagtacaaagacatcagtgac
atggatgagctgaaggcaccagagtgtgcagagacattcatgactctcctgcaagtcatc
acagaacgttatcgggccttgcccagtcctgcagcacagctcaggttttttgggctgcag
aaggaattggtcgatgacttccgcatacgactaactcaggtgatgaaagaagagtcccgc
tgcccactgggggtccggtactgcgccatcctcaatgcagtcaactacatttcaaccatt
ctgagagactggggggacaatgtgtttttcctccagctgcagcaggctgcggtttctctg
ggacagcaggaggttctgggcagcctggagatgacagaagtcgggcgtctggcctccctg
gaggggtctctgttcgatggtctgctgtcactgctggatcgactgaagggagacatgttg
ggaagaatgctgcactttctaatgagagacacggctgaaaaagcccagccatactgtcag
gaaagatggttgtccattccacctcctcaagaccagtctgccatgtccctgtccagttca
gcgtgtcccatgatgctttgcgtgagggatagactgttgaaccttcatcaggtcctgagt
gtttctctgttccaactcgcctggcagggtttggcagagaaactggacaacttcatttac
caagaggttattttgtctaatcacttcagtgatggtggagcggctcagcttcagttcgac
atgaccagaaacttgttccctctgttcggccattactgcagaagacctgagaactttttt
aagcatgtgaaggaagcgtgcattattttgtgtctaaaggttggctctgccattctccta
aaggatctccttaaacgctctgagcaggaagcaacagactttgaagatccttcaccagag
tctgctctgaatgagttgggagttttctgtttggcaccatgcgatgtgttaatccttctc
aacctcaaagctttactgccaggaatataa
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