Xiphophorus hellerii (green swordtail): 116736464
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Entry
116736464 CDS
T07363
Symbol
lrrc4
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116736464 (lrrc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116736464 (lrrc4)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
NGL family
116736464 (lrrc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_14
Ig_3
LRR_9
V-set
ig
LRRNT
Sp38
Ig_6
Ig_2
Motif
Other DBs
NCBI-GeneID:
116736464
NCBI-ProteinID:
XP_032444817
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Position
2:complement(12475068..12481940)
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AA seq
666 aa
AA seq
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MSPLAQVNVQSTWNTALLAVVSLMVPALSMCQSTGPELGSTIPQNCPGVCSCTNQLSKVV
CTRRGLIRVPPNIPANTRYLNLMENSIETIQADTFRHLHHLEVLQLGRNAIRQIEVGAFN
GLTSLNTLELFDNRLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRKLEYISEGAFEGLHNLKYLNLGMCSLREFPNLSPLLGLEELEISENVFPELKPGAFRG
LKNLRKLWIMNSAITIIERNAFDDITALVELNLAHNNLSSLPHNLFTPLQYLVELHLHHN
PWRCDCDVVWLSWWLRENIPTNSTCCGRCHTPVQMRGRYLVEVDQTTFQCSAPVILDAPR
DLNISAARVAEMKCRTAAMSSVRWLLPNGTVLTHSSAHPRISVLNDGTLNFSNVLPSDTG
VYTCMVSNMAGNSNASAYLNVSNAELNTSNLSYFTTVTVEVLEPTVEETPKPKPTLPASP
SVFQPVFISTPTVLFQNTQTPRQVSIPTARVPSGPPASLDEMMKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKRHQQRSTVAAARTIEIIQMEEEVPPVPPPTSGSSGSDETGLVLPTLVE
HNSNTFKPGYVSSSSSSRQGSYGAHWTQNNSLHRSVRQHHSHISIIADPYVIMTSHGKEK
VQETQI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgttggcccaggttaatgtgcagtctacctggaacacagccctgctagccgtg
gtttccctcatggtgcctgctcttagtatgtgccagtccacagggccggagttgggctca
acaattccacagaactgtccaggtgtttgctcctgcactaaccagctcagcaaggtggtg
tgcacccgcagaggcctgatcagggttcctccgaacatcccagccaacaccaggtacctg
aacctgatggagaacagcatagagaccatacaagcagataccttcagacatttgcatcat
ctggaggtgttgcaattgggcagaaatgcaatcaggcagattgaagttggggcttttaat
ggtttgactagcctcaataccctggagttgtttgacaacagactaacagtcataccaagt
ggagcttttgagtatctttcaaaattgagagagctgtggctcagaaataatccaattgag
agcattccctcttatgcctttaaccgagttccctcactcatgagactagacctgggagag
ttgaggaagttggagtacatctctgaaggggcttttgagggccttcataacctcaagtac
ctgaatttagggatgtgcagtttaagggagtttccaaatttgtcacctctcttgggactg
gaggagttggagatttctgaaaacgttttcccagagctaaagcccggggccttccgtggg
ctgaagaatttgcgtaaactttggattatgaactctgccattaccatcattgagaggaat
gcatttgatgacatcactgctttggtggagttgaatctagcccataataacttatcatcc
cttccccataacctgttcacccccctacagtacctggtggagctacatctacaccataac
ccttggcgctgtgattgtgatgtagtttggctttcctggtggctcagagaaaatattccc
acaaattccacctgttgtggacgctgccacactccagtccagatgagaggaagatactta
gtggaagttgatcaaacaacgtttcagtgttcagcaccagtcatactcgatgctccaaga
gatctgaacatttctgctgcaagggtggcggaaatgaagtgtcgtacagcagcaatgagc
tcggtccgatggcttctccccaatgggactgtgttaacccatagctcagctcatccaagg
atatctgttctcaatgatgggacactcaacttttccaatgttctcccttcagacacagga
gtctacacttgcatggtgagcaacatggcaggcaattccaatgcttctgcctatctcaat
gtcagcaatgctgaacttaacacttctaacctatcctactttacaactgtcacagtggaa
gtgttagagcccacagtggaggagacccctaagcccaagcccactttacctgcttcaccc
tctgtttttcaacctgtgttcatctccacaccaactgtgctgttccaaaatactcaaact
ccaaggcaggtatcaattcctacagccagagtacctagtgggccacctgccagtctggat
gagatgatgaaaaccacaaaaatcatcattggctgctttgtagctgttacattgctggca
gccgccatgttgatagcattctataaactgcgaaagaggcatcagcagagaagtactgtg
gctgcagccaggacaatagaaatcatacaaatggaggaagaggttccacctgttccacca
cctacatctggatccagtggctctgacgaaacaggtttggtactgccaacattagtggaa
cacaacagcaacacatttaaacctggatatgtgtcatcttcctcttcatcccgtcaaggg
agctatggggctcactggacccagaacaactctctccatcgctcagtcagacagcaccac
agccacatcagcatcattgctgatccctatgtcataatgacctctcacggcaaagagaaa
gttcaagagacccaaatctga
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