Xiphophorus hellerii (green swordtail): 116736475
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Entry
116736475 CDS
T07363
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116736475 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116736475 (mybpc1)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116736475 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
116736475
NCBI-ProteinID:
XP_032444848
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Position
17:complement(7261893..7407215)
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AA seq
1263 aa
AA seq
DB search
MPEPTKKDETPNGQSEESVAPDSNGAPTLPEISLEVSPPPESVAEGKEPVETDGKKPEPT
GPEPLQAVVAQEQNAIENGSNQREPSRVGVNEQAESSSPAVKEGTCSPPPAEDGNTVKKL
SIDLPNDSAPVATTGRKDSVWSLGEGQAPEDVDKPIDNPPLSTLLIERPQSGTVTVGSDI
TFVAKVEGKDLLRKPTVKWFKGKWMDLASKTGKHLQLKETFERQTKIHTFEMHIIKAKDN
YAGNYRCEVNYKDKFDSCSFDLEVKEVESSQAIDIRSAFKRSSEGQEDAGELDFSGLLKH
RNQREHKQQDDTPEVDVWEILKNARPDQYEKIAFMYGITDLRGLLKRMKKIPKEEKKSAA
FAKKLDPAYQVDKGGKIRLVVELADPTVDLKWYKNGQEIRPTPNQRKYIFEHKGTQRIMV
INNCSSNDDAAYSVVAGEEKCTTELFVKELPIKIVKGIEPVKTTVNERIELECEVSEEGA
QVKWMKNGVEVPTGVRSRYRVKCEGTKHYLVIDDASKDDTGTYSVMASGGTSEAHVQVDL
KPLKVFQDLQDMTVMLGQPIKLHCEIFPGNVPGRWYRNGQLIQPSDRLNIIHRAKIHRLE
IETSSLHDAGDYTFVPEGYSQSLSAKIHIIDPPRVHLESLNFPDNTITVVAGNKLRLEIP
ISGEPAPRVVWMKGERVILDSGHRVHAETYGDQTSLTIEVTEREDTGNYKIVLQNEAGEA
TASVKIKVVDIPDPPEAPLVPVVGGDWCSMTWEPPKYDGGSPILGYFIERKKKQSSRWMR
LNFDLIKETSFEPKKMIEGVPYEVRIFAVNAIGVSKPSEPSKAFTPLAVTSEPTMLVVDD
VTDTTVTVKWRPPETIGAAGLDGYLVEYCIEGTDDWVLSNKEVTEKTKYTITGLTPGSKI
LVRVKAINKAGASAPRTLQHSVLVKEVVEPPKIRVPRHLKQTYTRKVGETVNLVVPFQGK
PRPKVTWIKEGNPVEPSHVSIRNTDCDSIIFIRKADRNHSGKYEMTVQVENHVDTAIIDI
QIVDLPGPPQCVTIEDVWGENVALVWTPPKDSGNAPITGYTIQKADKKTMEWFTCIEHYH
RTCITITELVVGNEYFFRVFSENMCGLSELATQTKKSALIVKEGLQMKIPEYSDRDFKEP
PKFTQPLINTFAVAGYNATLNCSVRANPRPKVIWMKNKITIFDDPRYRMFSNQGVCTLEI
RKPSPYDGGMYTCKAINDLGEAQVECKLEVKGGFTFFELLQRGVPLHLIDKYMNESKIVE
QDK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgccagagccaacaaagaaagacgagacgccaaatggccagtcagaagaaagtgttgcc
ccagacagtaatggtgccccaaccctgcctgagatttccctggaggtttctcccccacca
gagtcggtagcagagggaaaagagccagtagagactgatgggaagaaaccagagcccact
ggtcctgagccattacaggctgtggtggctcaggagcagaacgccatcgagaacggttca
aaccaacgggagcctagtagggttggggtgaatgagcaagcagagtcctctagcccggct
gtaaaggagggcacttgctctccccctccggctgaggatggcaatacagtgaagaaactc
tcaattgacctgcctaatgatagtgcccctgtggcaaccacgggcagaaaagactcagtg
tggtctctgggagagggtcaggccccagaggatgtggacaaaccaatcgacaatccaccg
ttgtctacgctgctgatcgagaggccacagagtggaactgtcactgtggggagtgacatc
acttttgttgccaaggtggaaggtaaagatcttctccgcaaaccaactgttaaatggttt
aaagggaaatggatggacctagccagcaagacagggaaacacctgcaacttaaagagaca
tttgagcggcaaaccaagatccacacctttgagatgcacatcatcaaggccaaagacaac
tatgctggaaactacaggtgtgaggtgaactacaaggacaagtttgacagctgttccttt
gatttggaagttaaagaagttgaaagctcacaggctattgatattcgatcagcattcaaa
agaagcagtgaaggacaagaagatgcaggagagcttgactttagtggtctccttaaacat
agaaatcaaagggagcacaaacagcaagatgacaccccagaggtggacgtgtgggagatc
ctgaagaacgccaggccagaccagtatgagaaaattgccttcatgtacggcatcaccgac
ctcaggggcctcctgaaaagaatgaaaaagatacccaaagaggagaagaagagtgcagcc
tttgcaaagaagttggatccagcataccaggtggataaaggtggaaagatccgcttggta
gttgagctggcagaccccacagtggatctaaagtggtacaagaatggacaggagatcagg
cctactccaaatcaaaggaagtatatttttgaacataagggcacgcaaaggattatggtc
attaacaactgttcctctaatgatgatgcagcctattctgtggttgcaggagaagagaaa
tgtaccacagagctttttgtcaaagagctaccaataaagattgttaaaggtattgagcct
gtgaagactacagtgaacgaaaggattgagctggagtgtgaggtatcggaggaaggcgct
caagttaaatggatgaaaaatggcgttgaagtcccaacaggagttcgctcaaggtatcga
gtgaagtgtgaaggaaccaaacattacttggtcattgatgatgcctccaaagacgatact
ggaacgtattctgtcatggccagtggtggcacttcagaggctcatgttcaagtagactta
aaacccctgaaggtgtttcaggatctgcaggatatgacagtgatgctggggcaacccata
aagctacactgtgaaatcttcccaggaaatgtcccaggtcgttggtacaggaatggacag
ctgatccagccaagtgatcgtctcaacattatacacagggctaaaattcaccgactggaa
attgagacaagttcccttcatgatgcaggagattacacttttgtgcctgaaggatactca
caaagcctgtctgccaaaatccacattattgatcctccaagagtacatctagaaagcttg
aacttcccagacaacaccatcacagttgtggctggaaacaaactccgattagagatcccc
attagtggagaaccagcgcctagagtggtgtggatgaaaggagaaagggtgattcttgat
tcaggccacagagttcatgctgaaacttacggcgaccagaccagcctgacaattgaagtc
acagagcgcgaagacacaggaaactacaaaatagttttacagaatgaggcaggagaagct
acagctagtgtcaaaatcaaggttgttgacattcctgatccccctgaggcacctttggtt
ccagttgtgggtggtgattggtgttctatgacatgggaaccacccaagtatgatggaggt
tcacccatattaggatacttcattgagagaaaaaagaaacagagctccagatggatgagg
ctgaactttgacttgatcaaagaaacttcatttgaacctaagaagatgattgaaggagtg
ccatatgaagttcggatctttgcagtcaatgccattggcgtctccaaacccagtgaaccg
tccaaagcctttactcccctcgctgtgaccagtgagccgactatgctggttgtggacgat
gttacggacaccacagtgactgtaaagtggcgtcctccagaaaccattggggcagctggg
ctggatggatacttagtggagtactgcattgaaggaactgacgactgggtgctatccaac
aaagaggtgactgagaaaaccaagtacaccatcactggactaactccaggatctaagatt
ttagttcgagtcaaagccataaataaagctggagccagtgctccacgcactctgcagcac
tctgtcctggtcaaagaagtggttgaaccaccaaagatccgtgtcccgcgacacctgaaa
cagacttacactcgcaaagttggagaaactgttaaccttgtggtgcctttccagggaaaa
cctcggccaaaggttacttggatcaaggaaggcaatcctgtagaaccttcccatgttagc
atccgcaacacagactgtgacagcatcatttttatccgtaaagcagaccgaaaccactct
gggaagtatgagatgacggtacaggttgagaaccatgttgacacggcaattattgacata
cagattgtggatctaccaggaccgcctcagtgtgtcacaattgaagacgtttggggagaa
aatgtagctctagtgtggacccctccgaaagacagtggaaatgccccaataacaggctac
accattcaaaaagcagacaagaaaacaatggaatggttcacatgcattgagcactaccac
cggacctgcatcaccatcacagaactggtggtcgggaatgaatatttcttcagggtcttc
tcagaaaatatgtgtggtctgagcgaactggccacccagaccaaaaagagcgctctcatc
gtcaaagaaggcttgcagatgaaaatacccgagtacagcgaccgcgacttcaaggagcca
ccaaagttcactcaaccgcttatcaacacctttgctgttgccggctataacgctacgctg
aactgcagcgtccgtgccaacccaaggccaaaagtgatctggatgaagaataagataacc
atcttcgatgacccacgctaccgaatgtttagcaaccaaggagtctgcacactggagatc
aggaagcccagtccctatgatggcggcatgtacacctgcaaggccatcaatgacctgggg
gaggcccaggtggagtgcaagctggaggtcaaagggggatttaccttcttcgagctcctg
cagcgtggcgtacccttacacctgattgataaatacatgaacgagtcgaagatcgtagag
caagacaaatga
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