Xiphophorus hellerii (green swordtail): 116736552
Help
Entry
116736552 CDS
T07363
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116736552 (prdm4)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116736552 (prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
Zn_ribbon_PRDM4
zf-C2H2_4
SET
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
DUF7479
Zf-C2H2_ZNF451
zf-C2HE
zf-met
zf-C2H2_16
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
116736552
NCBI-ProteinID:
XP_032444938
LinkDB
All DBs
Position
17:complement(13314679..13323283)
Genome browser
AA seq
870 aa
AA seq
DB search
MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPIPTPGMPVAIPSLGPSLGSLPSALSL
MLPMGPLSDRGVMCGLPERNYSLPPPPYPHLESSYFRHLLPGILSYLADRPPPQYIHPSS
LNMDGTLSVASNNPSSLDPYSGPGGPLEQGLVPLDSRQVSGQAGPHELDSTGLAMESRVN
SPLSPDRMGEELASMDRVVAVAVSDAQQLGGGRQPQPHEGGVMPLHGPPVLELPVVMEPD
HLGARVGSSGTGGAGGGGAGGGGNGGLGEQLHGNGEMNPSVVSVVLTGSMSNPSQLEPVS
LHGHSGMGLEAVNVSSITAEVALGPENNLVLVNSTLQLEDPAPSKENMAAPCSIWCTLCE
RSYASDCPEHGPVTFIPDAPIQSRARLSLPRPLCLRISVTDEPLGVFARDVIPPRTCFGP
MVGQHCSNVDLSDWPEKDTPQIWKMYHNNVLEFYIVTTDENECNWMMFVRKARTHEEQNL
VAYPANGKLFFCTSTEIHPDQELLFYYSRDYCRLMGVPQVPDGQICQCGKECSSFSELKS
HLNSHSSNHSHNQPAHSHSPSLQDHAQTQQQQPAPPQQQQELQSQQHVPPEEKLLNSSSS
ASSSPWPCSNPAAGQANGDSRSANRNSNSVTSRGRGQGSVREKKYKCSMCSRAFITSTKL
NVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYKCTVCGKSFTQKSHVASHM
LIHTGAEKLKCDLCDRSFIRKQDLRQHMFSHTNERQIQCTKCNKHFLKTNHLKKHMNSHE
GKRDFVCEKCHKAFLTKYHLTRHLKICKGPKRDRTTRKEQNVFKEEEEEEEDEEDDDDEE
ERRGGDELNDEDYGLDVGGYSSEKSLSPPP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctgagtcctgtgggcatggaccagctgagtgtgccctcagtgagt
gccagccacctgggtctgcccacttctcccactcacaatcccattcccaccccaggcatg
ccggtggccatccccagtctgggcccgtccctcggctctctcccctctgctctgtccctg
atgctgcccatgggtcctctcagcgacagaggggtgatgtgtggcctgcctgagaggaat
tactccctgcctcctccgccgtatccccacctggagagcagttacttccgacacctactg
ccaggtattttgtcctacctggcagaccgtccacctcctcagtacattcatcccagcagc
cttaacatggacgggacgctgtctgtggccagcaacaacccttccagtctggacccctac
agcgggcctgggggccctctggagcagggcctggtgcccttggactcgaggcaggtcagc
ggtcaggctggccctcatgagctggactccacagggctggccatggagtcacgcgttaac
agcccgctgtctcctgaccggatgggggaggagctagccagcatggaccgggtggtggcg
gtggcggtgtccgacgcccagcagctcggcggaggacggcagcctcagcctcacgagggg
ggggtgatgcctctccacgggccccccgtgctggagcttcctgtggtgatggagccggac
cacctgggagccagagtgggaagctccgggacgggaggagctggaggcgggggagcggga
ggcggtggaaacggggggctcggggagcagctccacgggaacggagagatgaacccgagc
gtggtgagcgtggtgctcaccggctccatgtccaaccccagccagctggagcccgtgtct
ctccacggacattcggggatggggctggaggcggtcaacgtgtcctccatcaccgccgag
gtggccctcggccccgagaacaacctggtcctcgtcaactccaccctgcagctggaggat
ccggctcccagcaaggagaacatggccgccccctgctccatctggtgcacactgtgtgag
cgctcatacgcctccgactgtccggagcacggtccggtcaccttcatccccgacgcgccg
atccaaagccgggctcgcctctctttgccgcgtccgctctgtcttcgcatctctgtaacc
gatgaaccgcttggagtgtttgcgcgggacgtcattcctccgaggacctgcttcgggcca
atggtggggcagcactgcagcaacgtggacctctctgattggccagaaaaggacacgcct
cagatctggaagatgtaccacaacaacgtgctggagttctacatcgtgacgaccgatgag
aacgagtgcaactggatgatgtttgtgcgcaaggcgaggacccatgaagagcaaaatctg
gtggcgtaccccgccaacgggaagctgttcttctgtacgtccacagagattcaccccgac
caggagctgctcttctactacagccgagactactgcaggctgatgggtgttcctcaggtc
cccgacggccagatctgccagtgtggcaaagagtgctcgtcgttctccgagctcaagtct
cacctcaacagccatagcagcaaccacagccataaccagcctgcacacagtcacagccca
tcgctgcaggaccacgcccagacgcaacagcaacagccggcaccacctcagcagcaacaa
gagctgcagtcacagcaacacgttccacccgaggaaaagcttctcaacagcagctccagc
gcctcgtcctccccctggccttgtagcaaccccgccgcgggacaggcaaacggcgacagc
cgcagcgctaacaggaactccaacagcgttacctccagggggagaggccagggcagcgtg
cgggagaagaagtacaagtgcagcatgtgctctcgggctttcatcacttccaccaagctg
aacgtgcacttcatggggcacgtagggatgaagccgcacaagtgcgagtactgcagcaag
gcgttcagcgatcccagcaacctcaggatgcacctcaagattcacacaggtcagaagaac
tacaaatgcacagtttgcgggaagtcgttcactcagaaatctcacgtggcttcccacatg
ctcatccacaccggcgcagagaagctcaagtgtgacctttgcgacagatcgttcatcagg
aaacaagatctgagacaacacatgttctctcacaccaatgagcgccagattcagtgcaca
aagtgcaacaagcacttcctgaaaaccaaccacctgaaaaaacacatgaactctcacgag
ggcaagagagactttgtctgcgagaagtgccacaaagcttttcttactaaataccacctc
acacgtcacctcaagatctgcaaagggcccaagagagacagaaccactcgaaaggaacag
aacgttttcaaggaagaggaggaagaagaagaggacgaggaggacgacgacgacgaagag
gagagaagaggtggagacgaactgaatgatgaggactatggtttagatgttggaggttat
agctctgaaaagtccctgtcccctcctccttga
DBGET
integrated database retrieval system
