Xiphophorus hellerii (green swordtail): 116736566
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Entry
116736566 CDS
T07363
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116736566
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Cadherin related
116736566
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116736566
NCBI-ProteinID:
XP_032444972
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Position
17:214354..223487
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AA seq
673 aa
AA seq
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MSRMFCLLLWQLVLRVSCHVATGKNIYYIVSHGCCFSTSTAGSVWSLASLCTAGSNIFAS
VRENSPAGQFISHISIRSDPRANTVRLCLTGPNANWFYLEGRTIRLNSSASRVLDREVLG
PFLIAELTCYEDDIKQSHYRILVEILNENDNKPKFLEETIQPFIISEVAAVNSVVFTVKA
VDSDGDMISYIIDQSSEDAWFFRIDLPNSGKVVLSKPLDYESRARLQIIMWAQESNTEEK
FNISTVLTIDIEDVDDQYPHFLPCTPVSPGVPFCMNPIYTANITQKHQDSVLEFSPGPIR
ARDGDRGINAPLMYTILSGDNHDRFVMDNRTGEIRLTRAVDERQPGANFTLIVMVCQVED
RLKYSVATVVVRVLSENSFPPVFNTTTFKGFIIQSSSPASIVSTYGNQVLQVQVSDQDFS
DGVNPNIRFFLHPPSRLYQVTQEGVLIARTDQLRAFDRHILQVVARDEESGEEASASVDI
EVLQRGQAVPHGAFTEQLLFGDVDSRLAGGIVALILLTFLSAFLFLLLRFVRRRRPQEAD
VLPATTTLQHHKVSSRSPGFMDEALRRQASLRSGSFQGRQGLYIRRQSLPPPTSSSSAAD
SRSRPQSPSSEVSLSDPAGRCRFQTDLFVVVEKPAGVASGWARSPDVTAGLQVHAGMPQS
DEDINIDQSKEDT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgttctgtctgctgctgtggcagcttgttctcagagtttcctgccatgtt
gctacaggtaagaacatttactacatcgttagtcatgggtgctgcttcagtacatcaact
gctggttctgtttggtccttagctagtctgtgtacggctggctccaacatctttgcgtct
gtcagggagaacagtccagcgggtcagttcatctcacacatcagcatcagatctgaccca
agagccaacaccgtgcgtctgtgcctgaccggaccgaatgccaactggttctacttagaa
ggtcgaaccatcagactcaactcgtctgcatccagagtcctggaccgagaggttctgggt
ccgtttctgatcgccgagctcacctgttatgaggacgatatcaaacaaagccactacagg
attctggtggagattctgaatgaaaatgacaacaaaccaaagttcctggaggagaccatc
caaccgttcatcatcagcgaggttgcagcagtaaactctgtggttttcactgtgaaggct
gtcgactcagatggagatatgatcagctacatcatcgaccaatcctcggaagatgcatgg
ttcttcaggatcgacttgcccaacagtgggaaagtggtgctgagcaaacctctggactat
gaaagcagagctcgcctacagatcatcatgtgggcccaggaatcaaacactgaggagaag
ttcaacatctccactgtcctcaccatcgacattgaggatgttgacgaccagtatcctcac
ttcctgccctgcacacctgtgtcccctggagtcccgttctgcatgaacccaatctacaca
gccaacatcacacaaaaacaccaggactcggttctggagttttctcctggtccaatcaga
gccagggatggcgatcgaggcatcaacgctcctctcatgtatacgatcctgtcaggtgac
aatcatgacaggtttgtgatggacaacaggacaggtgagatcaggctaaccagagctgta
gacgagcgtcagccaggagcaaacttcacgctcatcgtcatggtgtgtcaggtagaggac
cggttaaagtacagcgtggccacagttgtggtcagggttctcagtgagaactccttcccg
ccagtctttaacacaaccaccttcaaaggcttcatcatccagagctcaagccccgcctcc
atcgtttccacctatgggaaccaggtgttgcaggtccaggtatctgaccaggatttctct
gatggagtgaacccaaacattcggttcttcctccatccgccatcccgactgtaccaggtg
acccaggagggggttctgatcgcccggacggaccagctgagggcctttgacagacacatt
ctgcaggttgttgccagggatgaagaatcaggagaagaagcttcagcttcagtggacatt
gaagtcctgcaacgaggacaggcagtgcctcatggtgcgttcacagagcaactgctattt
ggggatgtggacagcaggttggcaggaggaatcgtagctctgattctgctgacgtttctg
tcagccttcctgtttctgctgcttcgattcgtgcgaaggcgccggccgcaggaagctgat
gtcctgccagccaccacaaccttacagcaccataaggtgagttccaggtctccaggcttc
atggacgaggctctccgtcgccaagcctccttgcggtcaggcagcttccaaggcagacag
ggtctctacatccgtaggcagtctcttcctcctccaacttcctcctcctcagcagcagac
agcaggtccagacctcagtctccatcctcggaggtctctctcagcgatccggcaggccgc
tgccgcttccagacggatctgttcgtcgtggtagagaaacctgcaggtgtggcgtccggc
tgggcgaggtcacctgacgtcactgcaggcctgcaggtccatgctgggatgccccagagt
gacgaggacattaacattgaccaatcaaaggaggacacttga
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